Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Slc6a1P31648 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Slc6a1P31648 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Slc6a1P31648 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Slc6a1P31648 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Slc6a1P31648 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Slc6a1P31648 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Slc6a1P31648 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Slc6a1P31648 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Slc6a1P31648 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Slc6a1P31648 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Slc6a1P31648 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
Slc6a1P31648 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Slc6a1P31648 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Slc6a1P31648 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC12.27□□□□□ -0.45
Slc6a1P31648 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
Slc6a1P31648 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC12.27□□□□□ -0.45
Slc6a1P31648 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Slc6a1P31648 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC12.27□□□□□ -0.45
Slc6a1P31648 Gm2651-201ENSMUST00000203560 838 ntBASIC12.27□□□□□ -0.45
Slc6a1P31648 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Slc6a1P31648 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Slc6a1P31648 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Slc6a1P31648 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC12.27□□□□□ -0.45
Slc6a1P31648 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Slc6a1P31648 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Slc6a1P31648 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Slc6a1P31648 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Slc6a1P31648 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Slc6a1P31648 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Slc6a1P31648 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Slc6a1P31648 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Slc6a1P31648 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Slc6a1P31648 AC157650.3-201ENSMUST00000225058 1476 ntBASIC12.27□□□□□ -0.45
Slc6a1P31648 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.27□□□□□ -0.45
Slc6a1P31648 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.27□□□□□ -0.45
Slc6a1P31648 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Slc6a1P31648 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Slc6a1P31648 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Slc6a1P31648 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Slc6a1P31648 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Slc6a1P31648 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Slc6a1P31648 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Slc6a1P31648 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Slc6a1P31648 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC12.26□□□□□ -0.45
Slc6a1P31648 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Slc6a1P31648 Gm37411-201ENSMUST00000194180 2282 ntBASIC12.26□□□□□ -0.45
Slc6a1P31648 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.26□□□□□ -0.45
Slc6a1P31648 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.26□□□□□ -0.45
Slc6a1P31648 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Slc6a1P31648 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
Slc6a1P31648 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Slc6a1P31648 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Slc6a1P31648 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Slc6a1P31648 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Slc6a1P31648 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Slc6a1P31648 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Slc6a1P31648 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.26□□□□□ -0.45
Slc6a1P31648 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Slc6a1P31648 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Slc6a1P31648 Gm7230-201ENSMUST00000173026 815 ntBASIC12.26□□□□□ -0.45
Slc6a1P31648 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Slc6a1P31648 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC12.26□□□□□ -0.45
Slc6a1P31648 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Slc6a1P31648 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC12.26□□□□□ -0.45
Slc6a1P31648 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC12.26□□□□□ -0.45
Slc6a1P31648 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Slc6a1P31648 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Slc6a1P31648 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC12.26□□□□□ -0.45
Slc6a1P31648 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Slc6a1P31648 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Slc6a1P31648 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Slc6a1P31648 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Slc6a1P31648 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Slc6a1P31648 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Slc6a1P31648 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Slc6a1P31648 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Slc6a1P31648 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC12.26□□□□□ -0.45
Slc6a1P31648 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Slc6a1P31648 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Slc6a1P31648 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Slc6a1P31648 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Slc6a1P31648 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Slc6a1P31648 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Slc6a1P31648 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Slc6a1P31648 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.25□□□□□ -0.45
Slc6a1P31648 Gm38102-201ENSMUST00000192791 1935 ntBASIC12.25□□□□□ -0.45
Slc6a1P31648 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Slc6a1P31648 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
Slc6a1P31648 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Slc6a1P31648 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Slc6a1P31648 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Slc6a1P31648 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Slc6a1P31648 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Slc6a1P31648 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Slc6a1P31648 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Slc6a1P31648 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Slc6a1P31648 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC12.25□□□□□ -0.45
Slc6a1P31648 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC12.25□□□□□ -0.45
Slc6a1P31648 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms