Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Gm4971-201ENSMUST00000205991 1108 ntBASIC16.3■□□□□ 0.2
Vcam1P29533 Gm44719-201ENSMUST00000206404 149 ntBASIC16.3■□□□□ 0.2
Vcam1P29533 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC16.3■□□□□ 0.2
Vcam1P29533 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Vcam1P29533 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vcam1P29533 Gm9347-201ENSMUST00000211473 1607 ntBASIC16.3■□□□□ 0.2
Vcam1P29533 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.3■□□□□ 0.2
Vcam1P29533 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vcam1P29533 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Vcam1P29533 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC16.3■□□□□ 0.2
Vcam1P29533 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Vcam1P29533 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vcam1P29533 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Vcam1P29533 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vcam1P29533 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC16.29■□□□□ 0.2
Vcam1P29533 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.29■□□□□ 0.2
Vcam1P29533 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vcam1P29533 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Vcam1P29533 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vcam1P29533 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Vcam1P29533 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Vcam1P29533 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC16.29■□□□□ 0.2
Vcam1P29533 Gm24420-201ENSMUST00000176676 59 ntBASIC16.29■□□□□ 0.2
Vcam1P29533 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Vcam1P29533 Gm6266-201ENSMUST00000203844 806 ntBASIC16.29■□□□□ 0.2
Vcam1P29533 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vcam1P29533 AC192088.1-201ENSMUST00000227561 301 ntBASIC16.29■□□□□ 0.2
Vcam1P29533 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
Vcam1P29533 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vcam1P29533 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vcam1P29533 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Vcam1P29533 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vcam1P29533 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vcam1P29533 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vcam1P29533 AC126549.2-201ENSMUST00000223997 1976 ntBASIC16.29■□□□□ 0.2
Vcam1P29533 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Vcam1P29533 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vcam1P29533 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vcam1P29533 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC16.28■□□□□ 0.2
Vcam1P29533 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vcam1P29533 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vcam1P29533 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vcam1P29533 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Vcam1P29533 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Vcam1P29533 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC16.28■□□□□ 0.2
Vcam1P29533 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC16.28■□□□□ 0.2
Vcam1P29533 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Vcam1P29533 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Vcam1P29533 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC16.28■□□□□ 0.2
Vcam1P29533 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC16.28■□□□□ 0.2
Vcam1P29533 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Vcam1P29533 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC16.28■□□□□ 0.2
Vcam1P29533 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC16.28■□□□□ 0.2
Vcam1P29533 Gm8463-201ENSMUST00000208573 613 ntBASIC16.28■□□□□ 0.2
Vcam1P29533 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Vcam1P29533 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vcam1P29533 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Vcam1P29533 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Vcam1P29533 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Vcam1P29533 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
Vcam1P29533 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Vcam1P29533 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.28■□□□□ 0.2
Vcam1P29533 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Vcam1P29533 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Vcam1P29533 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC16.27■□□□□ 0.2
Vcam1P29533 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Vcam1P29533 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Vcam1P29533 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Vcam1P29533 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Vcam1P29533 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Vcam1P29533 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC16.27■□□□□ 0.2
Vcam1P29533 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Vcam1P29533 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC16.27■□□□□ 0.2
Vcam1P29533 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC16.27■□□□□ 0.2
Vcam1P29533 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Vcam1P29533 Gm27892-201ENSMUST00000185017 106 ntBASIC16.27■□□□□ 0.2
Vcam1P29533 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Vcam1P29533 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Vcam1P29533 CT030704.2-201ENSMUST00000228887 494 ntBASIC16.27■□□□□ 0.2
Vcam1P29533 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Vcam1P29533 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Vcam1P29533 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Vcam1P29533 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
Vcam1P29533 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Vcam1P29533 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Vcam1P29533 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC16.27■□□□□ 0.19
Vcam1P29533 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC16.27■□□□□ 0.19
Vcam1P29533 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Vcam1P29533 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Vcam1P29533 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Vcam1P29533 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Vcam1P29533 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Vcam1P29533 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Vcam1P29533 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Vcam1P29533 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Vcam1P29533 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vcam1P29533 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Vcam1P29533 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Vcam1P29533 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Vcam1P29533 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms