Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ccl6P27784 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Ccl6P27784 Gm5648-201ENSMUST00000122244 1587 ntBASIC11.13□□□□□ -0.63
Ccl6P27784 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Ccl6P27784 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ccl6P27784 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Ccl6P27784 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ccl6P27784 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ccl6P27784 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC11.13□□□□□ -0.63
Ccl6P27784 Gm11745-201ENSMUST00000121669 448 ntBASIC11.13□□□□□ -0.63
Ccl6P27784 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC11.13□□□□□ -0.63
Ccl6P27784 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC11.13□□□□□ -0.63
Ccl6P27784 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Ccl6P27784 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC11.13□□□□□ -0.63
Ccl6P27784 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Ccl6P27784 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Ccl6P27784 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ccl6P27784 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ccl6P27784 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC11.13□□□□□ -0.63
Ccl6P27784 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ccl6P27784 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
Ccl6P27784 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC11.13□□□□□ -0.63
Ccl6P27784 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Ccl6P27784 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ccl6P27784 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ccl6P27784 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ccl6P27784 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC11.13□□□□□ -0.63
Ccl6P27784 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ccl6P27784 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ccl6P27784 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Ccl6P27784 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Ccl6P27784 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ccl6P27784 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ccl6P27784 Gm6756-201ENSMUST00000180647 1620 ntBASIC11.13□□□□□ -0.63
Ccl6P27784 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC11.13□□□□□ -0.63
Ccl6P27784 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ccl6P27784 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC11.13□□□□□ -0.63
Ccl6P27784 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ccl6P27784 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccl6P27784 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccl6P27784 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccl6P27784 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccl6P27784 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccl6P27784 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccl6P27784 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccl6P27784 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccl6P27784 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccl6P27784 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC11.12□□□□□ -0.63
Ccl6P27784 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccl6P27784 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ccl6P27784 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ccl6P27784 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC11.12□□□□□ -0.63
Ccl6P27784 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccl6P27784 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Ccl6P27784 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC11.12□□□□□ -0.63
Ccl6P27784 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC11.12□□□□□ -0.63
Ccl6P27784 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccl6P27784 Gm44981-201ENSMUST00000205549 1943 ntBASIC11.12□□□□□ -0.63
Ccl6P27784 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC11.12□□□□□ -0.63
Ccl6P27784 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccl6P27784 Gm11543-201ENSMUST00000120758 370 ntBASIC11.12□□□□□ -0.63
Ccl6P27784 Gm14822-201ENSMUST00000122247 291 ntBASIC11.12□□□□□ -0.63
Ccl6P27784 Gm12017-201ENSMUST00000122453 1003 ntBASIC11.12□□□□□ -0.63
Ccl6P27784 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ccl6P27784 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC11.12□□□□□ -0.63
Ccl6P27784 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC11.12□□□□□ -0.63
Ccl6P27784 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC11.12□□□□□ -0.63
Ccl6P27784 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC11.12□□□□□ -0.63
Ccl6P27784 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC11.12□□□□□ -0.63
Ccl6P27784 AC225888.1-201ENSMUST00000227184 728 ntBASIC11.12□□□□□ -0.63
Ccl6P27784 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccl6P27784 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ccl6P27784 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccl6P27784 Gm15500-202ENSMUST00000071641 1019 ntBASIC11.12□□□□□ -0.63
Ccl6P27784 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccl6P27784 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC11.12□□□□□ -0.63
Ccl6P27784 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccl6P27784 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccl6P27784 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccl6P27784 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Ccl6P27784 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccl6P27784 Gm9252-201ENSMUST00000172364 1602 ntBASIC11.12□□□□□ -0.63
Ccl6P27784 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccl6P27784 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccl6P27784 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccl6P27784 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccl6P27784 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccl6P27784 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccl6P27784 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccl6P27784 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccl6P27784 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ccl6P27784 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC11.12□□□□□ -0.63
Ccl6P27784 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Ccl6P27784 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccl6P27784 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC11.12□□□□□ -0.63
Ccl6P27784 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccl6P27784 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC11.11□□□□□ -0.63
Ccl6P27784 Gm6018-201ENSMUST00000216090 1306 ntBASIC11.11□□□□□ -0.63
Ccl6P27784 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccl6P27784 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms