Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfrsf1bP25119 AA619741-201ENSMUST00000195095 646 ntBASIC13.2□□□□□ -0.3
Tnfrsf1bP25119 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC13.2□□□□□ -0.3
Tnfrsf1bP25119 Dupd1-202ENSMUST00000224735 548 ntBASIC13.2□□□□□ -0.3
Tnfrsf1bP25119 AC102291.3-201ENSMUST00000226566 405 ntBASIC13.2□□□□□ -0.3
Tnfrsf1bP25119 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfrsf1bP25119 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Tnfrsf1bP25119 Mir125a-201ENSMUST00000083545 68 ntBASIC13.2□□□□□ -0.3
Tnfrsf1bP25119 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Tnfrsf1bP25119 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfrsf1bP25119 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfrsf1bP25119 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfrsf1bP25119 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfrsf1bP25119 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfrsf1bP25119 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfrsf1bP25119 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfrsf1bP25119 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC13.2□□□□□ -0.3
Tnfrsf1bP25119 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfrsf1bP25119 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfrsf1bP25119 Gm45751-201ENSMUST00000210185 1573 ntBASIC13.2□□□□□ -0.3
Tnfrsf1bP25119 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Tnfrsf1bP25119 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfrsf1bP25119 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfrsf1bP25119 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfrsf1bP25119 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfrsf1bP25119 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfrsf1bP25119 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Tnfrsf1bP25119 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
Tnfrsf1bP25119 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfrsf1bP25119 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfrsf1bP25119 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfrsf1bP25119 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfrsf1bP25119 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC13.19□□□□□ -0.3
Tnfrsf1bP25119 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
Tnfrsf1bP25119 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfrsf1bP25119 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Tnfrsf1bP25119 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Tnfrsf1bP25119 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfrsf1bP25119 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC13.19□□□□□ -0.3
Tnfrsf1bP25119 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Tnfrsf1bP25119 Gm12882-201ENSMUST00000121696 517 ntBASIC13.19□□□□□ -0.3
Tnfrsf1bP25119 Mir1897-201ENSMUST00000122581 272 ntBASIC13.19□□□□□ -0.3
Tnfrsf1bP25119 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC13.19□□□□□ -0.3
Tnfrsf1bP25119 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfrsf1bP25119 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfrsf1bP25119 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC13.19□□□□□ -0.3
Tnfrsf1bP25119 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfrsf1bP25119 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC13.19□□□□□ -0.3
Tnfrsf1bP25119 Gm6888-201ENSMUST00000221983 706 ntBASIC13.19□□□□□ -0.3
Tnfrsf1bP25119 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfrsf1bP25119 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfrsf1bP25119 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Tnfrsf1bP25119 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfrsf1bP25119 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfrsf1bP25119 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfrsf1bP25119 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfrsf1bP25119 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfrsf1bP25119 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfrsf1bP25119 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfrsf1bP25119 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfrsf1bP25119 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC13.19□□□□□ -0.3
Tnfrsf1bP25119 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfrsf1bP25119 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfrsf1bP25119 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfrsf1bP25119 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfrsf1bP25119 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfrsf1bP25119 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfrsf1bP25119 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfrsf1bP25119 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfrsf1bP25119 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfrsf1bP25119 AC159621.2-201ENSMUST00000223519 1326 ntBASIC13.18□□□□□ -0.3
Tnfrsf1bP25119 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfrsf1bP25119 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfrsf1bP25119 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfrsf1bP25119 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfrsf1bP25119 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfrsf1bP25119 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfrsf1bP25119 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfrsf1bP25119 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Tnfrsf1bP25119 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC13.18□□□□□ -0.3
Tnfrsf1bP25119 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfrsf1bP25119 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Tnfrsf1bP25119 Gm27533-201ENSMUST00000183800 152 ntBASIC13.18□□□□□ -0.3
Tnfrsf1bP25119 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC13.18□□□□□ -0.3
Tnfrsf1bP25119 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC13.18□□□□□ -0.3
Tnfrsf1bP25119 AC126408.1-201ENSMUST00000225184 523 ntBASIC13.18□□□□□ -0.3
Tnfrsf1bP25119 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfrsf1bP25119 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfrsf1bP25119 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfrsf1bP25119 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Tnfrsf1bP25119 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfrsf1bP25119 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfrsf1bP25119 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfrsf1bP25119 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfrsf1bP25119 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfrsf1bP25119 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfrsf1bP25119 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfrsf1bP25119 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Tnfrsf1bP25119 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfrsf1bP25119 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms