Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Tnfrsf1aP25118 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Tnfrsf1aP25118 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Tnfrsf1aP25118 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
Tnfrsf1aP25118 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Tnfrsf1aP25118 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Tnfrsf1aP25118 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Tnfrsf1aP25118 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Tnfrsf1aP25118 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Tnfrsf1aP25118 Gm37912-201ENSMUST00000191895 3076 ntBASIC11.95□□□□□ -0.5
Tnfrsf1aP25118 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfrsf1aP25118 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfrsf1aP25118 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Tnfrsf1aP25118 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfrsf1aP25118 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfrsf1aP25118 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfrsf1aP25118 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Tnfrsf1aP25118 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Tnfrsf1aP25118 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfrsf1aP25118 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfrsf1aP25118 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Tnfrsf1aP25118 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfrsf1aP25118 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfrsf1aP25118 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfrsf1aP25118 Gm15427-201ENSMUST00000117288 531 ntBASIC11.95□□□□□ -0.5
Tnfrsf1aP25118 Gm12892-201ENSMUST00000117367 1146 ntBASIC11.95□□□□□ -0.5
Tnfrsf1aP25118 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC11.95□□□□□ -0.5
Tnfrsf1aP25118 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Tnfrsf1aP25118 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
Tnfrsf1aP25118 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
Tnfrsf1aP25118 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC11.95□□□□□ -0.5
Tnfrsf1aP25118 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC11.95□□□□□ -0.5
Tnfrsf1aP25118 Klk2-ps-201ENSMUST00000205342 571 ntBASIC11.95□□□□□ -0.5
Tnfrsf1aP25118 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC11.95□□□□□ -0.5
Tnfrsf1aP25118 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfrsf1aP25118 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfrsf1aP25118 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfrsf1aP25118 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfrsf1aP25118 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfrsf1aP25118 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfrsf1aP25118 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC11.95□□□□□ -0.5
Tnfrsf1aP25118 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfrsf1aP25118 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfrsf1aP25118 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Tnfrsf1aP25118 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfrsf1aP25118 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfrsf1aP25118 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfrsf1aP25118 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfrsf1aP25118 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfrsf1aP25118 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfrsf1aP25118 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfrsf1aP25118 AC155298.2-201ENSMUST00000225485 6226 ntBASIC11.95□□□□□ -0.5
Tnfrsf1aP25118 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tnfrsf1aP25118 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tnfrsf1aP25118 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Tnfrsf1aP25118 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tnfrsf1aP25118 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Tnfrsf1aP25118 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tnfrsf1aP25118 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC11.94□□□□□ -0.5
Tnfrsf1aP25118 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tnfrsf1aP25118 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tnfrsf1aP25118 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Tnfrsf1aP25118 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tnfrsf1aP25118 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Tnfrsf1aP25118 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Tnfrsf1aP25118 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Tnfrsf1aP25118 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tnfrsf1aP25118 Gm6226-201ENSMUST00000117765 1146 ntBASIC11.94□□□□□ -0.5
Tnfrsf1aP25118 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC11.94□□□□□ -0.5
Tnfrsf1aP25118 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC11.94□□□□□ -0.5
Tnfrsf1aP25118 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tnfrsf1aP25118 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC11.94□□□□□ -0.5
Tnfrsf1aP25118 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC11.94□□□□□ -0.5
Tnfrsf1aP25118 Gm37230-201ENSMUST00000194491 818 ntBASIC11.94□□□□□ -0.5
Tnfrsf1aP25118 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC11.94□□□□□ -0.5
Tnfrsf1aP25118 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC11.94□□□□□ -0.5
Tnfrsf1aP25118 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC11.94□□□□□ -0.5
Tnfrsf1aP25118 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tnfrsf1aP25118 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tnfrsf1aP25118 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Tnfrsf1aP25118 Gm5867-201ENSMUST00000063197 592 ntBASIC11.94□□□□□ -0.5
Tnfrsf1aP25118 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Tnfrsf1aP25118 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tnfrsf1aP25118 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tnfrsf1aP25118 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC11.94□□□□□ -0.5
Tnfrsf1aP25118 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC11.94□□□□□ -0.5
Tnfrsf1aP25118 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
Tnfrsf1aP25118 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Tnfrsf1aP25118 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Tnfrsf1aP25118 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tnfrsf1aP25118 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC11.94□□□□□ -0.5
Tnfrsf1aP25118 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Tnfrsf1aP25118 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Tnfrsf1aP25118 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tnfrsf1aP25118 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Tnfrsf1aP25118 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tnfrsf1aP25118 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Tnfrsf1aP25118 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tnfrsf1aP25118 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tnfrsf1aP25118 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms