Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pde6bP23440 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC15.58■□□□□ 0.08
Pde6bP23440 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pde6bP23440 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Pde6bP23440 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pde6bP23440 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pde6bP23440 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pde6bP23440 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pde6bP23440 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pde6bP23440 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Pde6bP23440 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Pde6bP23440 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Pde6bP23440 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Pde6bP23440 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pde6bP23440 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Pde6bP23440 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
Pde6bP23440 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pde6bP23440 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC15.57■□□□□ 0.08
Pde6bP23440 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Pde6bP23440 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pde6bP23440 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Pde6bP23440 Gm30437-201ENSMUST00000206086 1201 ntBASIC15.57■□□□□ 0.08
Pde6bP23440 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pde6bP23440 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Pde6bP23440 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pde6bP23440 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Pde6bP23440 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Pde6bP23440 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Pde6bP23440 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pde6bP23440 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pde6bP23440 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC15.57■□□□□ 0.08
Pde6bP23440 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Pde6bP23440 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC15.57■□□□□ 0.08
Pde6bP23440 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Pde6bP23440 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Pde6bP23440 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC15.57■□□□□ 0.08
Pde6bP23440 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pde6bP23440 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pde6bP23440 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Pde6bP23440 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Pde6bP23440 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pde6bP23440 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pde6bP23440 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pde6bP23440 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pde6bP23440 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pde6bP23440 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pde6bP23440 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pde6bP23440 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pde6bP23440 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC15.56■□□□□ 0.08
Pde6bP23440 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pde6bP23440 Gm45195-201ENSMUST00000205597 1008 ntBASIC15.56■□□□□ 0.08
Pde6bP23440 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC15.56■□□□□ 0.08
Pde6bP23440 AC121804.3-201ENSMUST00000223420 295 ntBASIC15.56■□□□□ 0.08
Pde6bP23440 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Pde6bP23440 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC15.56■□□□□ 0.08
Pde6bP23440 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC15.56■□□□□ 0.08
Pde6bP23440 Hist1h2al-201ENSMUST00000091708 339 ntBASIC15.56■□□□□ 0.08
Pde6bP23440 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
Pde6bP23440 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pde6bP23440 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pde6bP23440 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pde6bP23440 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pde6bP23440 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pde6bP23440 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pde6bP23440 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pde6bP23440 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC15.56■□□□□ 0.08
Pde6bP23440 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pde6bP23440 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pde6bP23440 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pde6bP23440 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Pde6bP23440 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pde6bP23440 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pde6bP23440 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Pde6bP23440 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pde6bP23440 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pde6bP23440 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pde6bP23440 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pde6bP23440 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pde6bP23440 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pde6bP23440 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Pde6bP23440 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pde6bP23440 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pde6bP23440 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pde6bP23440 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC15.55■□□□□ 0.08
Pde6bP23440 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pde6bP23440 Gm7390-201ENSMUST00000212452 1216 ntBASIC15.55■□□□□ 0.08
Pde6bP23440 AC154239.3-201ENSMUST00000226933 674 ntBASIC15.55■□□□□ 0.08
Pde6bP23440 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pde6bP23440 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pde6bP23440 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pde6bP23440 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pde6bP23440 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pde6bP23440 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pde6bP23440 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pde6bP23440 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pde6bP23440 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pde6bP23440 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pde6bP23440 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
Pde6bP23440 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pde6bP23440 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms