Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clk1P22518 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clk1P22518 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clk1P22518 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clk1P22518 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Clk1P22518 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.32□□□□□ -0.28
Clk1P22518 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clk1P22518 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Clk1P22518 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC13.31□□□□□ -0.28
Clk1P22518 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Clk1P22518 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC13.31□□□□□ -0.28
Clk1P22518 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clk1P22518 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
Clk1P22518 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clk1P22518 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clk1P22518 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clk1P22518 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clk1P22518 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clk1P22518 Gm10305-201ENSMUST00000195331 2475 ntBASIC13.31□□□□□ -0.28
Clk1P22518 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clk1P22518 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clk1P22518 Gm11025-201ENSMUST00000140773 466 ntBASIC13.31□□□□□ -0.28
Clk1P22518 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC13.31□□□□□ -0.28
Clk1P22518 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Clk1P22518 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Clk1P22518 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC13.31□□□□□ -0.28
Clk1P22518 CT030684.1-201ENSMUST00000227292 914 ntBASIC13.31□□□□□ -0.28
Clk1P22518 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clk1P22518 Gpr146-202ENSMUST00000053120 1040 ntBASIC13.31□□□□□ -0.28
Clk1P22518 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clk1P22518 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clk1P22518 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Clk1P22518 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Clk1P22518 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Clk1P22518 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clk1P22518 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13.31□□□□□ -0.28
Clk1P22518 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clk1P22518 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Clk1P22518 Camk2g-217ENSMUST00000226630 1937 ntBASIC13.31□□□□□ -0.28
Clk1P22518 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clk1P22518 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Clk1P22518 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Clk1P22518 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clk1P22518 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clk1P22518 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clk1P22518 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Clk1P22518 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clk1P22518 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clk1P22518 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clk1P22518 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Clk1P22518 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clk1P22518 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clk1P22518 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clk1P22518 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Clk1P22518 Gm4913-201ENSMUST00000117075 1290 ntBASIC13.3□□□□□ -0.28
Clk1P22518 Gm6226-201ENSMUST00000117765 1146 ntBASIC13.3□□□□□ -0.28
Clk1P22518 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC13.3□□□□□ -0.28
Clk1P22518 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC13.3□□□□□ -0.28
Clk1P22518 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC13.3□□□□□ -0.28
Clk1P22518 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Clk1P22518 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clk1P22518 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clk1P22518 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clk1P22518 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clk1P22518 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clk1P22518 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clk1P22518 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Clk1P22518 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clk1P22518 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clk1P22518 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Clk1P22518 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
Clk1P22518 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clk1P22518 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clk1P22518 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clk1P22518 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Clk1P22518 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Clk1P22518 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clk1P22518 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clk1P22518 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Clk1P22518 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clk1P22518 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Clk1P22518 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clk1P22518 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clk1P22518 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clk1P22518 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clk1P22518 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Clk1P22518 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clk1P22518 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Clk1P22518 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC13.29□□□□□ -0.28
Clk1P22518 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Clk1P22518 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clk1P22518 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.29□□□□□ -0.28
Clk1P22518 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clk1P22518 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clk1P22518 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clk1P22518 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Clk1P22518 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC13.29□□□□□ -0.28
Clk1P22518 Mir1895-201ENSMUST00000122615 79 ntBASIC13.29□□□□□ -0.28
Clk1P22518 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC13.29□□□□□ -0.28
Clk1P22518 Olfr286-202ENSMUST00000205305 969 ntBASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms