Protein–RNA interactions for Protein: P13438

Tpbpa, Trophoblast-specific protein alpha, mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TpbpaP13438 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TpbpaP13438 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC12.94□□□□□ -0.34
TpbpaP13438 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC12.94□□□□□ -0.34
TpbpaP13438 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC12.93□□□□□ -0.34
TpbpaP13438 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TpbpaP13438 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TpbpaP13438 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TpbpaP13438 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC12.93□□□□□ -0.34
TpbpaP13438 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TpbpaP13438 Gm44291-201ENSMUST00000203102 2865 ntBASIC12.93□□□□□ -0.34
TpbpaP13438 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TpbpaP13438 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC12.93□□□□□ -0.34
TpbpaP13438 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TpbpaP13438 Gm28182-201ENSMUST00000188354 2477 ntBASIC12.93□□□□□ -0.34
TpbpaP13438 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC12.93□□□□□ -0.34
TpbpaP13438 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC12.93□□□□□ -0.34
TpbpaP13438 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TpbpaP13438 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
TpbpaP13438 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC12.93□□□□□ -0.34
TpbpaP13438 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC12.93□□□□□ -0.34
TpbpaP13438 AC155729.1-201ENSMUST00000227758 544 ntBASIC12.93□□□□□ -0.34
TpbpaP13438 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TpbpaP13438 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
TpbpaP13438 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TpbpaP13438 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TpbpaP13438 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TpbpaP13438 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
TpbpaP13438 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
TpbpaP13438 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TpbpaP13438 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TpbpaP13438 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TpbpaP13438 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TpbpaP13438 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TpbpaP13438 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TpbpaP13438 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TpbpaP13438 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TpbpaP13438 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TpbpaP13438 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TpbpaP13438 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TpbpaP13438 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TpbpaP13438 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
TpbpaP13438 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
TpbpaP13438 AC119177.1-201ENSMUST00000227647 1332 ntBASIC12.92□□□□□ -0.34
TpbpaP13438 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TpbpaP13438 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TpbpaP13438 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TpbpaP13438 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TpbpaP13438 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TpbpaP13438 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
TpbpaP13438 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TpbpaP13438 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TpbpaP13438 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC12.92□□□□□ -0.34
TpbpaP13438 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TpbpaP13438 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC12.92□□□□□ -0.34
TpbpaP13438 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TpbpaP13438 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
TpbpaP13438 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC12.92□□□□□ -0.34
TpbpaP13438 Umpk-ps-201ENSMUST00000211897 827 ntBASIC12.92□□□□□ -0.34
TpbpaP13438 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC12.92□□□□□ -0.34
TpbpaP13438 AC161829.1-201ENSMUST00000220298 281 ntBASIC12.92□□□□□ -0.34
TpbpaP13438 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TpbpaP13438 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
TpbpaP13438 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC12.92□□□□□ -0.34
TpbpaP13438 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TpbpaP13438 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TpbpaP13438 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TpbpaP13438 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TpbpaP13438 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TpbpaP13438 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TpbpaP13438 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC12.92□□□□□ -0.34
TpbpaP13438 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
TpbpaP13438 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
TpbpaP13438 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TpbpaP13438 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.92□□□□□ -0.34
TpbpaP13438 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TpbpaP13438 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TpbpaP13438 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
TpbpaP13438 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TpbpaP13438 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TpbpaP13438 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TpbpaP13438 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
TpbpaP13438 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
TpbpaP13438 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
TpbpaP13438 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TpbpaP13438 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TpbpaP13438 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TpbpaP13438 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TpbpaP13438 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
TpbpaP13438 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
TpbpaP13438 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
TpbpaP13438 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
TpbpaP13438 Gm43056-201ENSMUST00000197865 2791 ntBASIC12.91□□□□□ -0.34
TpbpaP13438 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
TpbpaP13438 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC12.91□□□□□ -0.34
TpbpaP13438 Gm13464-201ENSMUST00000119418 935 ntBASIC12.91□□□□□ -0.34
TpbpaP13438 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TpbpaP13438 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC12.91□□□□□ -0.34
TpbpaP13438 Gm5864-201ENSMUST00000202263 970 ntBASIC12.91□□□□□ -0.34
TpbpaP13438 AC131709.1-201ENSMUST00000224731 1180 ntBASIC12.91□□□□□ -0.34
TpbpaP13438 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms