Protein–RNA interactions for Protein: P12850

Cxcl1, Growth-regulated alpha protein, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl1P12850 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cxcl1P12850 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cxcl1P12850 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cxcl1P12850 Gm11873-201ENSMUST00000117877 1304 ntBASIC11.81□□□□□ -0.52
Cxcl1P12850 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cxcl1P12850 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cxcl1P12850 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cxcl1P12850 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cxcl1P12850 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cxcl1P12850 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cxcl1P12850 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cxcl1P12850 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cxcl1P12850 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cxcl1P12850 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Cxcl1P12850 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cxcl1P12850 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cxcl1P12850 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cxcl1P12850 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cxcl1P12850 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Cxcl1P12850 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC11.8□□□□□ -0.52
Cxcl1P12850 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cxcl1P12850 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Cxcl1P12850 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
Cxcl1P12850 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cxcl1P12850 Gm24589-201ENSMUST00000116692 94 ntBASIC11.8□□□□□ -0.52
Cxcl1P12850 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC11.8□□□□□ -0.52
Cxcl1P12850 Gm13597-201ENSMUST00000121239 375 ntBASIC11.8□□□□□ -0.52
Cxcl1P12850 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cxcl1P12850 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cxcl1P12850 Gm5479-201ENSMUST00000160578 435 ntBASIC11.8□□□□□ -0.52
Cxcl1P12850 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
Cxcl1P12850 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cxcl1P12850 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cxcl1P12850 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC11.8□□□□□ -0.52
Cxcl1P12850 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cxcl1P12850 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cxcl1P12850 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Cxcl1P12850 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cxcl1P12850 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cxcl1P12850 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cxcl1P12850 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cxcl1P12850 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cxcl1P12850 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cxcl1P12850 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cxcl1P12850 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Cxcl1P12850 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC11.8□□□□□ -0.52
Cxcl1P12850 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cxcl1P12850 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Cxcl1P12850 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cxcl1P12850 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cxcl1P12850 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cxcl1P12850 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cxcl1P12850 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Cxcl1P12850 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cxcl1P12850 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cxcl1P12850 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cxcl1P12850 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cxcl1P12850 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cxcl1P12850 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC11.79□□□□□ -0.52
Cxcl1P12850 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cxcl1P12850 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cxcl1P12850 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cxcl1P12850 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cxcl1P12850 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Cxcl1P12850 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cxcl1P12850 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cxcl1P12850 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cxcl1P12850 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cxcl1P12850 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cxcl1P12850 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cxcl1P12850 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cxcl1P12850 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cxcl1P12850 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Cxcl1P12850 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cxcl1P12850 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cxcl1P12850 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Cxcl1P12850 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cxcl1P12850 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC11.79□□□□□ -0.52
Cxcl1P12850 Acot6-202ENSMUST00000222921 3622 ntBASIC11.79□□□□□ -0.52
Cxcl1P12850 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cxcl1P12850 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Cxcl1P12850 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cxcl1P12850 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Cxcl1P12850 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cxcl1P12850 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cxcl1P12850 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cxcl1P12850 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cxcl1P12850 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cxcl1P12850 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cxcl1P12850 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cxcl1P12850 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cxcl1P12850 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cxcl1P12850 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cxcl1P12850 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cxcl1P12850 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cxcl1P12850 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Cxcl1P12850 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cxcl1P12850 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Cxcl1P12850 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cxcl1P12850 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms