Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Hoxc6P10629 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hoxc6P10629 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hoxc6P10629 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hoxc6P10629 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hoxc6P10629 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hoxc6P10629 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.73■□□□□ 0.11
Hoxc6P10629 Gm16425-201ENSMUST00000118143 3130 ntBASIC15.73■□□□□ 0.11
Hoxc6P10629 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hoxc6P10629 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hoxc6P10629 Gm12928-201ENSMUST00000117115 573 ntBASIC15.73■□□□□ 0.11
Hoxc6P10629 Trav4d-2-201ENSMUST00000120914 335 ntBASIC15.73■□□□□ 0.11
Hoxc6P10629 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC15.73■□□□□ 0.11
Hoxc6P10629 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC15.73■□□□□ 0.11
Hoxc6P10629 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hoxc6P10629 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC15.73■□□□□ 0.11
Hoxc6P10629 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC15.73■□□□□ 0.11
Hoxc6P10629 Gm8652-201ENSMUST00000181363 964 ntBASIC15.73■□□□□ 0.11
Hoxc6P10629 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC15.73■□□□□ 0.11
Hoxc6P10629 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Hoxc6P10629 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC15.73■□□□□ 0.11
Hoxc6P10629 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Hoxc6P10629 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC15.73■□□□□ 0.11
Hoxc6P10629 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hoxc6P10629 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Hoxc6P10629 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hoxc6P10629 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Hoxc6P10629 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hoxc6P10629 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hoxc6P10629 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC15.73■□□□□ 0.11
Hoxc6P10629 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hoxc6P10629 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC15.73■□□□□ 0.11
Hoxc6P10629 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Hoxc6P10629 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hoxc6P10629 Gm42632-201ENSMUST00000201707 2411 ntBASIC15.73■□□□□ 0.11
Hoxc6P10629 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hoxc6P10629 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Hoxc6P10629 Gm29340-201ENSMUST00000188763 3854 ntBASIC15.72■□□□□ 0.11
Hoxc6P10629 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hoxc6P10629 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hoxc6P10629 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hoxc6P10629 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Hoxc6P10629 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC15.72■□□□□ 0.11
Hoxc6P10629 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hoxc6P10629 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Hoxc6P10629 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hoxc6P10629 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hoxc6P10629 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hoxc6P10629 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Hoxc6P10629 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hoxc6P10629 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hoxc6P10629 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Hoxc6P10629 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Hoxc6P10629 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hoxc6P10629 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Hoxc6P10629 Gm18027-201ENSMUST00000218947 619 ntBASIC15.72■□□□□ 0.11
Hoxc6P10629 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hoxc6P10629 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hoxc6P10629 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Hoxc6P10629 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hoxc6P10629 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Hoxc6P10629 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Hoxc6P10629 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hoxc6P10629 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hoxc6P10629 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Hoxc6P10629 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Hoxc6P10629 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hoxc6P10629 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hoxc6P10629 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hoxc6P10629 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hoxc6P10629 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Hoxc6P10629 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Hoxc6P10629 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hoxc6P10629 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
Hoxc6P10629 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hoxc6P10629 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hoxc6P10629 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC15.71■□□□□ 0.11
Hoxc6P10629 Gm8775-201ENSMUST00000170943 1327 ntBASIC15.71■□□□□ 0.11
Hoxc6P10629 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Hoxc6P10629 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hoxc6P10629 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hoxc6P10629 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Hoxc6P10629 Carlr-201ENSMUST00000181515 2574 ntBASIC15.71■□□□□ 0.11
Hoxc6P10629 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hoxc6P10629 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC15.71■□□□□ 0.11
Hoxc6P10629 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC15.71■□□□□ 0.11
Hoxc6P10629 Gm8062-201ENSMUST00000139696 444 ntBASIC15.71■□□□□ 0.11
Hoxc6P10629 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hoxc6P10629 Gm42693-201ENSMUST00000196779 631 ntBASIC15.71■□□□□ 0.11
Hoxc6P10629 Gm9728-201ENSMUST00000200197 1055 ntBASIC15.71■□□□□ 0.11
Hoxc6P10629 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC15.71■□□□□ 0.11
Hoxc6P10629 Gm10478-201ENSMUST00000084451 396 ntBASIC15.71■□□□□ 0.11
Hoxc6P10629 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Hoxc6P10629 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Hoxc6P10629 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Hoxc6P10629 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hoxc6P10629 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hoxc6P10629 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Hoxc6P10629 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.1
Hoxc6P10629 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms