Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Smim1P0C8K7 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Smim1P0C8K7 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Smim1P0C8K7 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Smim1P0C8K7 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC9.79□□□□□ -0.84
Smim1P0C8K7 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC9.79□□□□□ -0.84
Smim1P0C8K7 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Smim1P0C8K7 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Smim1P0C8K7 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Smim1P0C8K7 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Smim1P0C8K7 Gm6159-201ENSMUST00000191249 1724 ntBASIC9.79□□□□□ -0.84
Smim1P0C8K7 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Smim1P0C8K7 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC9.79□□□□□ -0.84
Smim1P0C8K7 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Smim1P0C8K7 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Smim1P0C8K7 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Smim1P0C8K7 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Smim1P0C8K7 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Smim1P0C8K7 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Smim1P0C8K7 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Smim1P0C8K7 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Smim1P0C8K7 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Smim1P0C8K7 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Smim1P0C8K7 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Smim1P0C8K7 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Smim1P0C8K7 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Smim1P0C8K7 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Smim1P0C8K7 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Smim1P0C8K7 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Smim1P0C8K7 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC9.78□□□□□ -0.84
Smim1P0C8K7 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC9.78□□□□□ -0.84
Smim1P0C8K7 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Smim1P0C8K7 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Smim1P0C8K7 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Smim1P0C8K7 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC9.78□□□□□ -0.84
Smim1P0C8K7 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC9.78□□□□□ -0.84
Smim1P0C8K7 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Smim1P0C8K7 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Smim1P0C8K7 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC9.78□□□□□ -0.84
Smim1P0C8K7 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Smim1P0C8K7 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Smim1P0C8K7 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Smim1P0C8K7 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Smim1P0C8K7 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Smim1P0C8K7 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC9.78□□□□□ -0.84
Smim1P0C8K7 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Smim1P0C8K7 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Smim1P0C8K7 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Smim1P0C8K7 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Smim1P0C8K7 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Smim1P0C8K7 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Smim1P0C8K7 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Smim1P0C8K7 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC9.78□□□□□ -0.84
Smim1P0C8K7 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Smim1P0C8K7 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC9.78□□□□□ -0.84
Smim1P0C8K7 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Smim1P0C8K7 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.84
Smim1P0C8K7 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.84
Smim1P0C8K7 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
Smim1P0C8K7 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.84
Smim1P0C8K7 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC9.77□□□□□ -0.84
Smim1P0C8K7 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Smim1P0C8K7 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Smim1P0C8K7 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.84
Smim1P0C8K7 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC9.77□□□□□ -0.84
Smim1P0C8K7 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Smim1P0C8K7 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Smim1P0C8K7 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Smim1P0C8K7 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.84
Smim1P0C8K7 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.84
Smim1P0C8K7 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Smim1P0C8K7 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Smim1P0C8K7 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Smim1P0C8K7 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Smim1P0C8K7 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Smim1P0C8K7 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Smim1P0C8K7 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Smim1P0C8K7 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Smim1P0C8K7 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Smim1P0C8K7 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Smim1P0C8K7 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Smim1P0C8K7 Krtap5-1-202ENSMUST00000188274 742 ntBASIC9.77□□□□□ -0.85
Smim1P0C8K7 Gm37856-201ENSMUST00000191634 999 ntBASIC9.77□□□□□ -0.85
Smim1P0C8K7 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Smim1P0C8K7 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC9.77□□□□□ -0.85
Smim1P0C8K7 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC9.77□□□□□ -0.85
Smim1P0C8K7 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Smim1P0C8K7 AC122024.2-201ENSMUST00000220086 871 ntBASIC9.77□□□□□ -0.85
Smim1P0C8K7 AC125350.1-201ENSMUST00000225115 903 ntBASIC9.77□□□□□ -0.85
Smim1P0C8K7 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Smim1P0C8K7 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Smim1P0C8K7 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
Smim1P0C8K7 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Smim1P0C8K7 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Smim1P0C8K7 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Smim1P0C8K7 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC9.77□□□□□ -0.85
Smim1P0C8K7 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Smim1P0C8K7 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC9.77□□□□□ -0.85
Smim1P0C8K7 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Smim1P0C8K7 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms