Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
ApoeP08226 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
ApoeP08226 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ApoeP08226 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ApoeP08226 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ApoeP08226 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
ApoeP08226 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ApoeP08226 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
ApoeP08226 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC13.49□□□□□ -0.25
ApoeP08226 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
ApoeP08226 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ApoeP08226 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
ApoeP08226 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC13.49□□□□□ -0.25
ApoeP08226 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ApoeP08226 Gm37230-201ENSMUST00000194491 818 ntBASIC13.49□□□□□ -0.25
ApoeP08226 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ApoeP08226 Gm2272-201ENSMUST00000194903 582 ntBASIC13.49□□□□□ -0.25
ApoeP08226 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC13.49□□□□□ -0.25
ApoeP08226 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ApoeP08226 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ApoeP08226 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ApoeP08226 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ApoeP08226 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ApoeP08226 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
ApoeP08226 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ApoeP08226 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ApoeP08226 Acot6-202ENSMUST00000222921 3622 ntBASIC13.49□□□□□ -0.25
ApoeP08226 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ApoeP08226 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ApoeP08226 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
ApoeP08226 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ApoeP08226 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.49□□□□□ -0.25
ApoeP08226 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ApoeP08226 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
ApoeP08226 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
ApoeP08226 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ApoeP08226 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ApoeP08226 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
ApoeP08226 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
ApoeP08226 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ApoeP08226 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ApoeP08226 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ApoeP08226 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ApoeP08226 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ApoeP08226 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ApoeP08226 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ApoeP08226 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
ApoeP08226 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ApoeP08226 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ApoeP08226 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ApoeP08226 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ApoeP08226 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ApoeP08226 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
ApoeP08226 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ApoeP08226 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
ApoeP08226 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ApoeP08226 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ApoeP08226 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ApoeP08226 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ApoeP08226 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ApoeP08226 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
ApoeP08226 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ApoeP08226 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC13.48□□□□□ -0.25
ApoeP08226 Gm7230-201ENSMUST00000173026 815 ntBASIC13.48□□□□□ -0.25
ApoeP08226 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
ApoeP08226 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC13.48□□□□□ -0.25
ApoeP08226 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC13.48□□□□□ -0.25
ApoeP08226 Gm45747-201ENSMUST00000212203 999 ntBASIC13.48□□□□□ -0.25
ApoeP08226 Gm18669-201ENSMUST00000216049 778 ntBASIC13.48□□□□□ -0.25
ApoeP08226 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ApoeP08226 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ApoeP08226 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ApoeP08226 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ApoeP08226 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ApoeP08226 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ApoeP08226 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
ApoeP08226 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ApoeP08226 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
ApoeP08226 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ApoeP08226 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ApoeP08226 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
ApoeP08226 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ApoeP08226 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
ApoeP08226 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.47□□□□□ -0.25
ApoeP08226 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
ApoeP08226 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
ApoeP08226 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ApoeP08226 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ApoeP08226 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.47□□□□□ -0.25
ApoeP08226 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
ApoeP08226 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ApoeP08226 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ApoeP08226 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ApoeP08226 Gm6550-201ENSMUST00000187574 993 ntBASIC13.47□□□□□ -0.25
ApoeP08226 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC13.47□□□□□ -0.25
ApoeP08226 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC13.47□□□□□ -0.25
ApoeP08226 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC13.47□□□□□ -0.25
ApoeP08226 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.47□□□□□ -0.25
ApoeP08226 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ApoeP08226 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms