Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Gm16476-201ENSMUST00000221544 139 ntBASIC12.71□□□□□ -0.37
P06344 Shd-206ENSMUST00000225145 998 ntBASIC12.71□□□□□ -0.37
P06344 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC12.71□□□□□ -0.37
P06344 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
P06344 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
P06344 Gm10275-201ENSMUST00000092620 635 ntBASIC12.71□□□□□ -0.37
P06344 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
P06344 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC12.71□□□□□ -0.38
P06344 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
P06344 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
P06344 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
P06344 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
P06344 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
P06344 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
P06344 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
P06344 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
P06344 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC12.71□□□□□ -0.38
P06344 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
P06344 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
P06344 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
P06344 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
P06344 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
P06344 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
P06344 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
P06344 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
P06344 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
P06344 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
P06344 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
P06344 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC12.7□□□□□ -0.38
P06344 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
P06344 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC12.7□□□□□ -0.38
P06344 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
P06344 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
P06344 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC12.7□□□□□ -0.38
P06344 Gm14042-201ENSMUST00000120139 833 ntBASIC12.7□□□□□ -0.38
P06344 Mir1897-201ENSMUST00000122581 272 ntBASIC12.7□□□□□ -0.38
P06344 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
P06344 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC12.7□□□□□ -0.38
P06344 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
P06344 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
P06344 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
P06344 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
P06344 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC12.7□□□□□ -0.38
P06344 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
P06344 Gm9063-201ENSMUST00000223299 582 ntBASIC12.7□□□□□ -0.38
P06344 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC12.7□□□□□ -0.38
P06344 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
P06344 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
P06344 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC12.7□□□□□ -0.38
P06344 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
P06344 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
P06344 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
P06344 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
P06344 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
P06344 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
P06344 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
P06344 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
P06344 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
P06344 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
P06344 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
P06344 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
P06344 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
P06344 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
P06344 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC12.69□□□□□ -0.38
P06344 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
P06344 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
P06344 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
P06344 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
P06344 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
P06344 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
P06344 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
P06344 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
P06344 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
P06344 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
P06344 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
P06344 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
P06344 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC12.69□□□□□ -0.38
P06344 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
P06344 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
P06344 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
P06344 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
P06344 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
P06344 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
P06344 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
P06344 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
P06344 Gm27989-201ENSMUST00000184721 107 ntBASIC12.69□□□□□ -0.38
P06344 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
P06344 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
P06344 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
P06344 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
P06344 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
P06344 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
P06344 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC12.69□□□□□ -0.38
P06344 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
P06344 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
P06344 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
P06344 AC124751.1-201ENSMUST00000222716 1408 ntBASIC12.69□□□□□ -0.38
P06344 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
P06344 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
P06344 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms