Protein–RNA interactions for Protein: P06323

T-cell receptor alpha chain V region CTL-F3, mousemouse

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06323 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC11.56□□□□□ -0.56
P06323 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
P06323 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
P06323 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
P06323 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
P06323 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
P06323 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
P06323 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
P06323 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
P06323 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
P06323 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
P06323 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
P06323 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
P06323 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
P06323 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
P06323 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
P06323 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
P06323 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
P06323 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
P06323 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
P06323 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
P06323 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
P06323 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
P06323 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
P06323 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
P06323 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
P06323 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
P06323 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
P06323 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
P06323 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
P06323 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
P06323 Gm14042-201ENSMUST00000120139 833 ntBASIC11.55□□□□□ -0.56
P06323 Gm13597-201ENSMUST00000121239 375 ntBASIC11.55□□□□□ -0.56
P06323 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
P06323 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC11.55□□□□□ -0.56
P06323 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC11.55□□□□□ -0.56
P06323 Olfr286-202ENSMUST00000205305 969 ntBASIC11.55□□□□□ -0.56
P06323 Thap2-203ENSMUST00000218989 527 ntBASIC11.55□□□□□ -0.56
P06323 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
P06323 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC11.55□□□□□ -0.56
P06323 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
P06323 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
P06323 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
P06323 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
P06323 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
P06323 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
P06323 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
P06323 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
P06323 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
P06323 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC11.55□□□□□ -0.56
P06323 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
P06323 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
P06323 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
P06323 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
P06323 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC11.54□□□□□ -0.56
P06323 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
P06323 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
P06323 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
P06323 Tcf21-202ENSMUST00000218002 1788 ntBASIC11.54□□□□□ -0.56
P06323 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
P06323 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
P06323 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
P06323 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
P06323 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
P06323 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
P06323 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
P06323 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
P06323 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
P06323 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC11.54□□□□□ -0.56
P06323 Gm16198-201ENSMUST00000118766 670 ntBASIC11.54□□□□□ -0.56
P06323 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
P06323 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC11.54□□□□□ -0.56
P06323 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC11.54□□□□□ -0.56
P06323 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC11.54□□□□□ -0.56
P06323 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
P06323 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
P06323 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC11.54□□□□□ -0.56
P06323 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
P06323 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
P06323 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
P06323 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
P06323 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
P06323 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
P06323 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
P06323 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
P06323 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC11.54□□□□□ -0.56
P06323 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
P06323 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
P06323 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
P06323 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
P06323 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
P06323 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
P06323 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
P06323 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
P06323 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
P06323 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
P06323 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
P06323 Gm4081-201ENSMUST00000195287 1838 ntBASIC11.53□□□□□ -0.56
P06323 Ntrk2-208ENSMUST00000225583 2719 ntBASIC11.53□□□□□ -0.56
P06323 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 81 ms