Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxa3P02831 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Hoxa3P02831 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxa3P02831 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxa3P02831 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxa3P02831 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxa3P02831 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxa3P02831 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC11.97□□□□□ -0.49
Hoxa3P02831 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hoxa3P02831 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hoxa3P02831 Gm37019-201ENSMUST00000192133 2134 ntBASIC11.96□□□□□ -0.49
Hoxa3P02831 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Hoxa3P02831 Gm10605-202ENSMUST00000183019 3198 ntBASIC11.96□□□□□ -0.49
Hoxa3P02831 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
Hoxa3P02831 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Hoxa3P02831 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hoxa3P02831 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hoxa3P02831 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hoxa3P02831 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC11.96□□□□□ -0.49
Hoxa3P02831 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hoxa3P02831 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hoxa3P02831 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hoxa3P02831 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hoxa3P02831 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.49
Hoxa3P02831 Gm5566-201ENSMUST00000116118 459 ntBASIC11.96□□□□□ -0.49
Hoxa3P02831 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Hoxa3P02831 Gm9719-201ENSMUST00000162765 543 ntBASIC11.96□□□□□ -0.49
Hoxa3P02831 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC11.96□□□□□ -0.49
Hoxa3P02831 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Hoxa3P02831 AC125206.2-201ENSMUST00000217454 574 ntBASIC11.96□□□□□ -0.49
Hoxa3P02831 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hoxa3P02831 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Hoxa3P02831 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hoxa3P02831 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hoxa3P02831 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hoxa3P02831 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hoxa3P02831 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Hoxa3P02831 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Hoxa3P02831 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Hoxa3P02831 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Hoxa3P02831 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Hoxa3P02831 Fbxl12-205ENSMUST00000140702 1555 ntBASIC11.96□□□□□ -0.5
Hoxa3P02831 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Hoxa3P02831 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Hoxa3P02831 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC11.96□□□□□ -0.5
Hoxa3P02831 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Hoxa3P02831 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Hoxa3P02831 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hoxa3P02831 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hoxa3P02831 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Hoxa3P02831 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hoxa3P02831 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC11.95□□□□□ -0.5
Hoxa3P02831 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hoxa3P02831 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC11.95□□□□□ -0.5
Hoxa3P02831 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hoxa3P02831 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Hoxa3P02831 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hoxa3P02831 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hoxa3P02831 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Hoxa3P02831 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC11.95□□□□□ -0.5
Hoxa3P02831 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC11.95□□□□□ -0.5
Hoxa3P02831 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC11.95□□□□□ -0.5
Hoxa3P02831 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Hoxa3P02831 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Hoxa3P02831 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC11.95□□□□□ -0.5
Hoxa3P02831 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Hoxa3P02831 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC11.95□□□□□ -0.5
Hoxa3P02831 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC11.95□□□□□ -0.5
Hoxa3P02831 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hoxa3P02831 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Hoxa3P02831 Gm27680-201ENSMUST00000184192 160 ntBASIC11.95□□□□□ -0.5
Hoxa3P02831 Gm29310-201ENSMUST00000185468 696 ntBASIC11.95□□□□□ -0.5
Hoxa3P02831 Gm21825-201ENSMUST00000185728 696 ntBASIC11.95□□□□□ -0.5
Hoxa3P02831 Gm29109-201ENSMUST00000185895 696 ntBASIC11.95□□□□□ -0.5
Hoxa3P02831 Gm21896-201ENSMUST00000186520 696 ntBASIC11.95□□□□□ -0.5
Hoxa3P02831 Gm21873-201ENSMUST00000186728 696 ntBASIC11.95□□□□□ -0.5
Hoxa3P02831 Gm21794-201ENSMUST00000187056 696 ntBASIC11.95□□□□□ -0.5
Hoxa3P02831 Gm21880-201ENSMUST00000187275 696 ntBASIC11.95□□□□□ -0.5
Hoxa3P02831 Gm21826-201ENSMUST00000187451 696 ntBASIC11.95□□□□□ -0.5
Hoxa3P02831 Gm21198-201ENSMUST00000188393 696 ntBASIC11.95□□□□□ -0.5
Hoxa3P02831 Gm21749-201ENSMUST00000189343 696 ntBASIC11.95□□□□□ -0.5
Hoxa3P02831 Gm21901-201ENSMUST00000189568 696 ntBASIC11.95□□□□□ -0.5
Hoxa3P02831 Gm29424-201ENSMUST00000189716 696 ntBASIC11.95□□□□□ -0.5
Hoxa3P02831 Gm28599-201ENSMUST00000189838 694 ntBASIC11.95□□□□□ -0.5
Hoxa3P02831 Gm21867-201ENSMUST00000189917 696 ntBASIC11.95□□□□□ -0.5
Hoxa3P02831 Gm29269-201ENSMUST00000190087 696 ntBASIC11.95□□□□□ -0.5
Hoxa3P02831 Gm21722-201ENSMUST00000190153 696 ntBASIC11.95□□□□□ -0.5
Hoxa3P02831 Gm28423-201ENSMUST00000190701 696 ntBASIC11.95□□□□□ -0.5
Hoxa3P02831 Gm21899-201ENSMUST00000190745 696 ntBASIC11.95□□□□□ -0.5
Hoxa3P02831 Gm21910-201ENSMUST00000191163 696 ntBASIC11.95□□□□□ -0.5
Hoxa3P02831 Gm21849-201ENSMUST00000191571 696 ntBASIC11.95□□□□□ -0.5
Hoxa3P02831 Gm28678-201ENSMUST00000191593 696 ntBASIC11.95□□□□□ -0.5
Hoxa3P02831 Gm20910-201ENSMUST00000193268 696 ntBASIC11.95□□□□□ -0.5
Hoxa3P02831 Gm37230-201ENSMUST00000194491 818 ntBASIC11.95□□□□□ -0.5
Hoxa3P02831 Gm21871-201ENSMUST00000194621 696 ntBASIC11.95□□□□□ -0.5
Hoxa3P02831 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Hoxa3P02831 Gm7775-201ENSMUST00000218871 853 ntBASIC11.95□□□□□ -0.5
Hoxa3P02831 Shd-206ENSMUST00000225145 998 ntBASIC11.95□□□□□ -0.5
Hoxa3P02831 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hoxa3P02831 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms