Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Igh-VJ558P01758 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Igh-VJ558P01758 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC12.33□□□□□ -0.44
Igh-VJ558P01758 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Igh-VJ558P01758 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Igh-VJ558P01758 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Igh-VJ558P01758 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Igh-VJ558P01758 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Igh-VJ558P01758 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
Igh-VJ558P01758 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Igh-VJ558P01758 AC166491.1-201ENSMUST00000227053 2308 ntBASIC12.33□□□□□ -0.44
Igh-VJ558P01758 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Igh-VJ558P01758 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Igh-VJ558P01758 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Igh-VJ558P01758 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Igh-VJ558P01758 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Igh-VJ558P01758 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Igh-VJ558P01758 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Igh-VJ558P01758 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Igh-VJ558P01758 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Igh-VJ558P01758 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Igh-VJ558P01758 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Igh-VJ558P01758 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Igh-VJ558P01758 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Igh-VJ558P01758 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Igh-VJ558P01758 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Igh-VJ558P01758 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Igh-VJ558P01758 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Igh-VJ558P01758 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Igh-VJ558P01758 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Igh-VJ558P01758 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Igh-VJ558P01758 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Igh-VJ558P01758 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Igh-VJ558P01758 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Igh-VJ558P01758 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Igh-VJ558P01758 Gm45751-201ENSMUST00000210185 1573 ntBASIC12.32□□□□□ -0.44
Igh-VJ558P01758 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Igh-VJ558P01758 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Igh-VJ558P01758 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC12.32□□□□□ -0.44
Igh-VJ558P01758 Gm14822-201ENSMUST00000122247 291 ntBASIC12.32□□□□□ -0.44
Igh-VJ558P01758 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Igh-VJ558P01758 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC12.32□□□□□ -0.44
Igh-VJ558P01758 Gm27397-201ENSMUST00000184997 107 ntBASIC12.32□□□□□ -0.44
Igh-VJ558P01758 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC12.32□□□□□ -0.44
Igh-VJ558P01758 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC12.32□□□□□ -0.44
Igh-VJ558P01758 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Igh-VJ558P01758 Gm45453-201ENSMUST00000211758 853 ntBASIC12.32□□□□□ -0.44
Igh-VJ558P01758 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Igh-VJ558P01758 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Igh-VJ558P01758 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Igh-VJ558P01758 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Igh-VJ558P01758 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Igh-VJ558P01758 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Igh-VJ558P01758 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Igh-VJ558P01758 Gm9347-201ENSMUST00000211473 1607 ntBASIC12.32□□□□□ -0.44
Igh-VJ558P01758 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Igh-VJ558P01758 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Igh-VJ558P01758 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Igh-VJ558P01758 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC12.32□□□□□ -0.44
Igh-VJ558P01758 Gm12020-201ENSMUST00000119030 2042 ntBASIC12.32□□□□□ -0.44
Igh-VJ558P01758 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC12.32□□□□□ -0.44
Igh-VJ558P01758 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Igh-VJ558P01758 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Igh-VJ558P01758 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Igh-VJ558P01758 Gm15889-202ENSMUST00000212669 2443 ntBASIC12.31□□□□□ -0.44
Igh-VJ558P01758 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Igh-VJ558P01758 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Igh-VJ558P01758 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Igh-VJ558P01758 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Igh-VJ558P01758 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Igh-VJ558P01758 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Igh-VJ558P01758 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Igh-VJ558P01758 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Igh-VJ558P01758 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Igh-VJ558P01758 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Igh-VJ558P01758 Gm5566-201ENSMUST00000116118 459 ntBASIC12.31□□□□□ -0.44
Igh-VJ558P01758 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Igh-VJ558P01758 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Igh-VJ558P01758 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Igh-VJ558P01758 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Igh-VJ558P01758 Chchd1-203ENSMUST00000224633 557 ntBASIC12.31□□□□□ -0.44
Igh-VJ558P01758 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Igh-VJ558P01758 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Igh-VJ558P01758 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Igh-VJ558P01758 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Igh-VJ558P01758 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Igh-VJ558P01758 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Igh-VJ558P01758 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Igh-VJ558P01758 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Igh-VJ558P01758 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Igh-VJ558P01758 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Igh-VJ558P01758 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Igh-VJ558P01758 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Igh-VJ558P01758 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
Igh-VJ558P01758 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Igh-VJ558P01758 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC12.31□□□□□ -0.44
Igh-VJ558P01758 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Igh-VJ558P01758 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Igh-VJ558P01758 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Igh-VJ558P01758 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms