Protein–RNA interactions for Protein: O88879

Apaf1, Apoptotic protease-activating factor 1, mousemouse

Predictions only

Length 1,249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apaf1O88879 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Apaf1O88879 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Apaf1O88879 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Apaf1O88879 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Apaf1O88879 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC18.5■□□□□ 0.55
Apaf1O88879 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Apaf1O88879 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC18.5■□□□□ 0.55
Apaf1O88879 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Apaf1O88879 Gm16215-201ENSMUST00000161990 637 ntBASIC18.5■□□□□ 0.55
Apaf1O88879 Gm27437-201ENSMUST00000183429 107 ntBASIC18.5■□□□□ 0.55
Apaf1O88879 Ighv8-14-201ENSMUST00000196781 358 ntBASIC18.5■□□□□ 0.55
Apaf1O88879 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC18.5■□□□□ 0.55
Apaf1O88879 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Apaf1O88879 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Apaf1O88879 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Apaf1O88879 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Apaf1O88879 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Apaf1O88879 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Apaf1O88879 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Apaf1O88879 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Apaf1O88879 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Apaf1O88879 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Apaf1O88879 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Apaf1O88879 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Apaf1O88879 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Apaf1O88879 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Apaf1O88879 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Apaf1O88879 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Apaf1O88879 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Apaf1O88879 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Apaf1O88879 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Apaf1O88879 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Apaf1O88879 Gm9522-201ENSMUST00000182394 926 ntBASIC18.49■□□□□ 0.55
Apaf1O88879 Mir6977-201ENSMUST00000184960 64 ntBASIC18.49■□□□□ 0.55
Apaf1O88879 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC18.49■□□□□ 0.55
Apaf1O88879 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Apaf1O88879 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC18.49■□□□□ 0.55
Apaf1O88879 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Apaf1O88879 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Apaf1O88879 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Apaf1O88879 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Apaf1O88879 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
Apaf1O88879 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Apaf1O88879 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Apaf1O88879 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Apaf1O88879 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Apaf1O88879 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC18.49■□□□□ 0.55
Apaf1O88879 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Apaf1O88879 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Apaf1O88879 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Apaf1O88879 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Apaf1O88879 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Apaf1O88879 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Apaf1O88879 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Apaf1O88879 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Apaf1O88879 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Apaf1O88879 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Apaf1O88879 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Apaf1O88879 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Apaf1O88879 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Apaf1O88879 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Apaf1O88879 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC18.48■□□□□ 0.55
Apaf1O88879 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC18.48■□□□□ 0.55
Apaf1O88879 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Apaf1O88879 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC18.48■□□□□ 0.55
Apaf1O88879 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Apaf1O88879 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Apaf1O88879 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC18.48■□□□□ 0.55
Apaf1O88879 Gm6473-201ENSMUST00000188572 1210 ntBASIC18.48■□□□□ 0.55
Apaf1O88879 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Apaf1O88879 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC18.48■□□□□ 0.55
Apaf1O88879 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC18.48■□□□□ 0.55
Apaf1O88879 CT025535.1-201ENSMUST00000227172 491 ntBASIC18.48■□□□□ 0.55
Apaf1O88879 AC154806.6-201ENSMUST00000228192 202 ntBASIC18.48■□□□□ 0.55
Apaf1O88879 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Apaf1O88879 Gm38058-201ENSMUST00000194323 4368 ntBASIC18.48■□□□□ 0.55
Apaf1O88879 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Apaf1O88879 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Apaf1O88879 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Apaf1O88879 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Apaf1O88879 AC154231.1-201ENSMUST00000220564 2175 ntBASIC18.48■□□□□ 0.55
Apaf1O88879 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Apaf1O88879 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Apaf1O88879 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Apaf1O88879 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Apaf1O88879 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Apaf1O88879 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Apaf1O88879 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Apaf1O88879 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Apaf1O88879 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Apaf1O88879 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Apaf1O88879 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Apaf1O88879 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Apaf1O88879 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Apaf1O88879 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Apaf1O88879 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC18.47■□□□□ 0.55
Apaf1O88879 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC18.47■□□□□ 0.55
Apaf1O88879 Gm44608-201ENSMUST00000206827 855 ntBASIC18.47■□□□□ 0.55
Apaf1O88879 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC18.47■□□□□ 0.55
Apaf1O88879 AC124732.1-201ENSMUST00000221551 910 ntBASIC18.47■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 74.5 ms