Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC17.33■□□□□ 0.36
Cops6O88545 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC17.33■□□□□ 0.36
Cops6O88545 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cops6O88545 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cops6O88545 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cops6O88545 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cops6O88545 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cops6O88545 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cops6O88545 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Cops6O88545 AC114543.1-201ENSMUST00000226451 1558 ntBASIC17.32■□□□□ 0.36
Cops6O88545 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC17.32■□□□□ 0.36
Cops6O88545 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cops6O88545 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Cops6O88545 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cops6O88545 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cops6O88545 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Cops6O88545 Gm13829-201ENSMUST00000119600 138 ntBASIC17.32■□□□□ 0.36
Cops6O88545 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC17.32■□□□□ 0.36
Cops6O88545 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cops6O88545 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cops6O88545 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cops6O88545 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cops6O88545 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Cops6O88545 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cops6O88545 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cops6O88545 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cops6O88545 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cops6O88545 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cops6O88545 Gm6159-201ENSMUST00000191249 1724 ntBASIC17.32■□□□□ 0.36
Cops6O88545 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cops6O88545 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cops6O88545 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Cops6O88545 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cops6O88545 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Cops6O88545 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Cops6O88545 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cops6O88545 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cops6O88545 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cops6O88545 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cops6O88545 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Cops6O88545 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cops6O88545 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC17.31■□□□□ 0.36
Cops6O88545 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cops6O88545 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cops6O88545 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cops6O88545 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cops6O88545 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC17.31■□□□□ 0.36
Cops6O88545 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cops6O88545 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cops6O88545 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cops6O88545 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cops6O88545 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Cops6O88545 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC17.31■□□□□ 0.36
Cops6O88545 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC17.31■□□□□ 0.36
Cops6O88545 Gm17150-201ENSMUST00000165577 381 ntBASIC17.31■□□□□ 0.36
Cops6O88545 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cops6O88545 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Cops6O88545 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cops6O88545 Gm38037-201ENSMUST00000192600 1624 ntBASIC17.31■□□□□ 0.36
Cops6O88545 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cops6O88545 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Cops6O88545 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cops6O88545 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Cops6O88545 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cops6O88545 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cops6O88545 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cops6O88545 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cops6O88545 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cops6O88545 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Cops6O88545 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cops6O88545 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cops6O88545 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Cops6O88545 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cops6O88545 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cops6O88545 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cops6O88545 AC115735.4-201ENSMUST00000227460 1944 ntBASIC17.3■□□□□ 0.36
Cops6O88545 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Cops6O88545 Gm11557-201ENSMUST00000120200 1008 ntBASIC17.3■□□□□ 0.36
Cops6O88545 Gm13385-201ENSMUST00000121089 220 ntBASIC17.3■□□□□ 0.36
Cops6O88545 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cops6O88545 Gm8927-201ENSMUST00000181978 981 ntBASIC17.3■□□□□ 0.36
Cops6O88545 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cops6O88545 Gm43094-201ENSMUST00000196549 921 ntBASIC17.3■□□□□ 0.36
Cops6O88545 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC17.3■□□□□ 0.36
Cops6O88545 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cops6O88545 Gm3222-201ENSMUST00000071282 990 ntBASIC17.3■□□□□ 0.36
Cops6O88545 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Cops6O88545 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cops6O88545 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC17.3■□□□□ 0.36
Cops6O88545 Gm42471-201ENSMUST00000201457 1865 ntBASIC17.3■□□□□ 0.36
Cops6O88545 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cops6O88545 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cops6O88545 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cops6O88545 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cops6O88545 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cops6O88545 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC17.3■□□□□ 0.36
Cops6O88545 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC17.3■□□□□ 0.36
Cops6O88545 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cops6O88545 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Cops6O88545 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms