Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Pdlim1O70400 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.08□□□□□ -0.15
Pdlim1O70400 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Pdlim1O70400 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pdlim1O70400 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.08□□□□□ -0.16
Pdlim1O70400 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pdlim1O70400 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Pdlim1O70400 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pdlim1O70400 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pdlim1O70400 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pdlim1O70400 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pdlim1O70400 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pdlim1O70400 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC14.08□□□□□ -0.16
Pdlim1O70400 Mir1897-201ENSMUST00000122581 272 ntBASIC14.08□□□□□ -0.16
Pdlim1O70400 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pdlim1O70400 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Pdlim1O70400 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC14.08□□□□□ -0.16
Pdlim1O70400 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Pdlim1O70400 Rbfox2-208ENSMUST00000227930 1218 ntBASIC14.08□□□□□ -0.16
Pdlim1O70400 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pdlim1O70400 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Pdlim1O70400 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pdlim1O70400 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pdlim1O70400 AC159621.2-201ENSMUST00000223519 1326 ntBASIC14.08□□□□□ -0.16
Pdlim1O70400 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Pdlim1O70400 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Pdlim1O70400 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pdlim1O70400 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Pdlim1O70400 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.08□□□□□ -0.16
Pdlim1O70400 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Pdlim1O70400 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pdlim1O70400 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pdlim1O70400 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Pdlim1O70400 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pdlim1O70400 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Pdlim1O70400 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pdlim1O70400 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pdlim1O70400 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Pdlim1O70400 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Pdlim1O70400 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
Pdlim1O70400 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pdlim1O70400 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pdlim1O70400 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pdlim1O70400 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pdlim1O70400 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pdlim1O70400 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pdlim1O70400 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pdlim1O70400 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pdlim1O70400 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pdlim1O70400 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pdlim1O70400 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pdlim1O70400 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pdlim1O70400 Gm10676-201ENSMUST00000098778 3221 ntBASIC14.07□□□□□ -0.16
Pdlim1O70400 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC14.07□□□□□ -0.16
Pdlim1O70400 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Pdlim1O70400 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC14.07□□□□□ -0.16
Pdlim1O70400 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC14.07□□□□□ -0.16
Pdlim1O70400 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC14.07□□□□□ -0.16
Pdlim1O70400 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pdlim1O70400 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pdlim1O70400 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC14.07□□□□□ -0.16
Pdlim1O70400 Gm6888-201ENSMUST00000221983 706 ntBASIC14.07□□□□□ -0.16
Pdlim1O70400 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pdlim1O70400 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pdlim1O70400 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pdlim1O70400 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pdlim1O70400 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pdlim1O70400 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pdlim1O70400 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pdlim1O70400 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pdlim1O70400 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pdlim1O70400 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pdlim1O70400 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pdlim1O70400 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Pdlim1O70400 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pdlim1O70400 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Pdlim1O70400 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pdlim1O70400 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pdlim1O70400 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pdlim1O70400 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pdlim1O70400 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pdlim1O70400 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pdlim1O70400 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pdlim1O70400 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pdlim1O70400 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pdlim1O70400 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pdlim1O70400 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pdlim1O70400 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pdlim1O70400 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Pdlim1O70400 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pdlim1O70400 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pdlim1O70400 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.06□□□□□ -0.16
Pdlim1O70400 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pdlim1O70400 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pdlim1O70400 Gm17837-201ENSMUST00000186435 985 ntBASIC14.06□□□□□ -0.16
Pdlim1O70400 Ighv1-25-201ENSMUST00000195638 345 ntBASIC14.06□□□□□ -0.16
Pdlim1O70400 Gm44344-201ENSMUST00000200287 129 ntBASIC14.06□□□□□ -0.16
Pdlim1O70400 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC14.06□□□□□ -0.16
Pdlim1O70400 AC139350.3-201ENSMUST00000226151 420 ntBASIC14.06□□□□□ -0.16
Pdlim1O70400 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms