Protein–RNA interactions for Protein: O70137

Alx3, Homeobox protein aristaless-like 3, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx3O70137 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Alx3O70137 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Alx3O70137 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Alx3O70137 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Alx3O70137 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC13.03□□□□□ -0.32
Alx3O70137 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Alx3O70137 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Alx3O70137 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Alx3O70137 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Alx3O70137 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
Alx3O70137 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Alx3O70137 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Alx3O70137 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Alx3O70137 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC13.02□□□□□ -0.32
Alx3O70137 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Alx3O70137 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Alx3O70137 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Alx3O70137 Gm4081-201ENSMUST00000195287 1838 ntBASIC13.02□□□□□ -0.32
Alx3O70137 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Alx3O70137 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Alx3O70137 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.32
Alx3O70137 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Alx3O70137 Gm16198-201ENSMUST00000118766 670 ntBASIC13.02□□□□□ -0.33
Alx3O70137 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC13.02□□□□□ -0.33
Alx3O70137 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC13.02□□□□□ -0.33
Alx3O70137 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Alx3O70137 4930513D17Rik-203ENSMUST00000202800 1159 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Alx3O70137 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC13.02□□□□□ -0.33
Alx3O70137 Gm9182-201ENSMUST00000217829 639 ntBASIC13.02□□□□□ -0.33
Alx3O70137 AC114573.1-201ENSMUST00000224120 1210 ntBASIC13.02□□□□□ -0.33
Alx3O70137 AC106830.1-201ENSMUST00000228032 1003 ntBASIC13.02□□□□□ -0.33
Alx3O70137 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Alx3O70137 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC13.02□□□□□ -0.33
Alx3O70137 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Alx3O70137 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
Alx3O70137 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Alx3O70137 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Alx3O70137 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
Alx3O70137 Gm13233-201ENSMUST00000118760 1443 ntBASIC13.02□□□□□ -0.33
Alx3O70137 Gm13244-201ENSMUST00000118855 1446 ntBASIC13.02□□□□□ -0.33
Alx3O70137 Gm20632-201ENSMUST00000176760 2427 ntBASIC13.02□□□□□ -0.33
Alx3O70137 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.02□□□□□ -0.33
Alx3O70137 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Alx3O70137 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Alx3O70137 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Alx3O70137 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Alx3O70137 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC13.02□□□□□ -0.33
Alx3O70137 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Alx3O70137 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Alx3O70137 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Alx3O70137 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Alx3O70137 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
Alx3O70137 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Alx3O70137 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Alx3O70137 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Alx3O70137 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Alx3O70137 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.01□□□□□ -0.33
Alx3O70137 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Alx3O70137 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Alx3O70137 Gm12813-201ENSMUST00000119615 902 ntBASIC13.01□□□□□ -0.33
Alx3O70137 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Alx3O70137 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC13.01□□□□□ -0.33
Alx3O70137 Gm5177-201ENSMUST00000183092 997 ntBASIC13.01□□□□□ -0.33
Alx3O70137 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Alx3O70137 Gm7430-201ENSMUST00000193824 1144 ntBASIC13.01□□□□□ -0.33
Alx3O70137 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Alx3O70137 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC13.01□□□□□ -0.33
Alx3O70137 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Alx3O70137 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Alx3O70137 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.01□□□□□ -0.33
Alx3O70137 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Alx3O70137 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Alx3O70137 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Alx3O70137 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Alx3O70137 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Alx3O70137 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Alx3O70137 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Alx3O70137 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Alx3O70137 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Alx3O70137 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Alx3O70137 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Alx3O70137 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Alx3O70137 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Alx3O70137 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
Alx3O70137 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Alx3O70137 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Alx3O70137 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Alx3O70137 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Alx3O70137 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Alx3O70137 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Alx3O70137 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Alx3O70137 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Alx3O70137 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Alx3O70137 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Alx3O70137 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC13□□□□□ -0.33
Alx3O70137 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13□□□□□ -0.33
Alx3O70137 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Alx3O70137 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Alx3O70137 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC13□□□□□ -0.33
Alx3O70137 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms