Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Pde6dO55057 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pde6dO55057 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pde6dO55057 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pde6dO55057 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pde6dO55057 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pde6dO55057 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pde6dO55057 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pde6dO55057 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC11.23□□□□□ -0.61
Pde6dO55057 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pde6dO55057 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC11.23□□□□□ -0.61
Pde6dO55057 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pde6dO55057 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Pde6dO55057 AC154262.2-201ENSMUST00000224310 2293 ntBASIC11.23□□□□□ -0.61
Pde6dO55057 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Pde6dO55057 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pde6dO55057 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC11.23□□□□□ -0.61
Pde6dO55057 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pde6dO55057 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pde6dO55057 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pde6dO55057 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Pde6dO55057 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pde6dO55057 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pde6dO55057 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
Pde6dO55057 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pde6dO55057 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC11.22□□□□□ -0.61
Pde6dO55057 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pde6dO55057 Gm13836-201ENSMUST00000121159 501 ntBASIC11.22□□□□□ -0.61
Pde6dO55057 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Pde6dO55057 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Pde6dO55057 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Pde6dO55057 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
Pde6dO55057 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Pde6dO55057 Gm37055-201ENSMUST00000191866 133 ntBASIC11.22□□□□□ -0.61
Pde6dO55057 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Pde6dO55057 Gm43799-201ENSMUST00000201845 579 ntBASIC11.22□□□□□ -0.61
Pde6dO55057 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pde6dO55057 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC11.22□□□□□ -0.61
Pde6dO55057 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pde6dO55057 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pde6dO55057 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pde6dO55057 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pde6dO55057 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pde6dO55057 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pde6dO55057 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pde6dO55057 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pde6dO55057 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pde6dO55057 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pde6dO55057 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pde6dO55057 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Pde6dO55057 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pde6dO55057 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pde6dO55057 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pde6dO55057 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pde6dO55057 Gm10305-201ENSMUST00000195331 2475 ntBASIC11.21□□□□□ -0.61
Pde6dO55057 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pde6dO55057 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pde6dO55057 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pde6dO55057 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pde6dO55057 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pde6dO55057 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pde6dO55057 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pde6dO55057 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Pde6dO55057 Gm37133-201ENSMUST00000192705 1922 ntBASIC11.21□□□□□ -0.61
Pde6dO55057 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pde6dO55057 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pde6dO55057 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Pde6dO55057 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Pde6dO55057 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pde6dO55057 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pde6dO55057 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pde6dO55057 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pde6dO55057 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Pde6dO55057 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pde6dO55057 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pde6dO55057 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pde6dO55057 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Pde6dO55057 Gm10729-202ENSMUST00000193403 1375 ntBASIC11.21□□□□□ -0.61
Pde6dO55057 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Pde6dO55057 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pde6dO55057 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
Pde6dO55057 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
Pde6dO55057 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Pde6dO55057 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Pde6dO55057 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Pde6dO55057 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC11.21□□□□□ -0.61
Pde6dO55057 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pde6dO55057 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC11.21□□□□□ -0.61
Pde6dO55057 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC11.21□□□□□ -0.61
Pde6dO55057 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Pde6dO55057 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC11.21□□□□□ -0.61
Pde6dO55057 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Pde6dO55057 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Pde6dO55057 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Pde6dO55057 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Pde6dO55057 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Pde6dO55057 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC11.21□□□□□ -0.62
Pde6dO55057 Gm40377-201ENSMUST00000204604 2015 ntBASIC11.21□□□□□ -0.62
Pde6dO55057 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Pde6dO55057 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms