Protein–RNA interactions for Protein: O54908

Dkk1, Dickkopf-related protein 1, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dkk1O54908 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Dkk1O54908 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Dkk1O54908 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Dkk1O54908 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Dkk1O54908 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Dkk1O54908 Ptprs-211ENSMUST00000223859 5588 ntBASIC12.9□□□□□ -0.34
Dkk1O54908 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Dkk1O54908 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Dkk1O54908 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Dkk1O54908 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Dkk1O54908 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Dkk1O54908 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Dkk1O54908 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
Dkk1O54908 Gm12460-201ENSMUST00000117147 357 ntBASIC12.9□□□□□ -0.34
Dkk1O54908 Sva-202ENSMUST00000117406 645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Dkk1O54908 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC12.9□□□□□ -0.34
Dkk1O54908 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Dkk1O54908 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Dkk1O54908 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC12.9□□□□□ -0.34
Dkk1O54908 Vmn1r-ps62-201ENSMUST00000173275 910 ntBASIC12.9□□□□□ -0.34
Dkk1O54908 Mir8117-201ENSMUST00000184773 107 ntBASIC12.9□□□□□ -0.34
Dkk1O54908 4930565D16Rik-201ENSMUST00000192777 1112 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Dkk1O54908 Gm42603-201ENSMUST00000199893 2146 ntBASIC12.9□□□□□ -0.34
Dkk1O54908 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Dkk1O54908 Gm5307-201ENSMUST00000204772 760 ntBASIC12.9□□□□□ -0.34
Dkk1O54908 Gm44733-202ENSMUST00000209063 582 ntTSL 5 BASIC12.9□□□□□ -0.34
Dkk1O54908 Gm45747-201ENSMUST00000212203 999 ntBASIC12.9□□□□□ -0.34
Dkk1O54908 1700063D05Rik-204ENSMUST00000213914 1007 ntTSL 5 BASIC12.9□□□□□ -0.34
Dkk1O54908 AC153955.1-201ENSMUST00000217458 663 ntTSL 3 BASIC12.9□□□□□ -0.34
Dkk1O54908 9530050K03Rik-201ENSMUST00000221663 1299 ntBASIC12.9□□□□□ -0.34
Dkk1O54908 Gm6562-201ENSMUST00000221903 464 ntBASIC12.9□□□□□ -0.34
Dkk1O54908 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Dkk1O54908 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Dkk1O54908 Pik3c2g-201ENSMUST00000032353 1206 ntTSL 5 BASIC12.9□□□□□ -0.34
Dkk1O54908 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Dkk1O54908 Olfr849-201ENSMUST00000063923 939 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Dkk1O54908 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Dkk1O54908 Gm10175-201ENSMUST00000086013 645 ntBASIC12.9□□□□□ -0.34
Dkk1O54908 Mxra8os-201ENSMUST00000097740 687 ntBASIC12.9□□□□□ -0.34
Dkk1O54908 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Dkk1O54908 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Dkk1O54908 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC12.9□□□□□ -0.34
Dkk1O54908 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Dkk1O54908 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Dkk1O54908 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC12.9□□□□□ -0.34
Dkk1O54908 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Dkk1O54908 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Dkk1O54908 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Dkk1O54908 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Dkk1O54908 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Dkk1O54908 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Dkk1O54908 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Dkk1O54908 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Dkk1O54908 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Dkk1O54908 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
Dkk1O54908 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Dkk1O54908 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Dkk1O54908 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC12.89□□□□□ -0.35
Dkk1O54908 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Dkk1O54908 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Dkk1O54908 Gm18594-201ENSMUST00000175733 1403 ntBASIC12.89□□□□□ -0.35
Dkk1O54908 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Dkk1O54908 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Dkk1O54908 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Dkk1O54908 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Dkk1O54908 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Dkk1O54908 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Dkk1O54908 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Dkk1O54908 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Dkk1O54908 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC12.89□□□□□ -0.35
Dkk1O54908 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Dkk1O54908 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC12.89□□□□□ -0.35
Dkk1O54908 Oosp3-202ENSMUST00000119053 621 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Dkk1O54908 Gm15467-201ENSMUST00000120582 445 ntBASIC12.89□□□□□ -0.35
Dkk1O54908 Gm25102-201ENSMUST00000122479 112 ntBASIC12.89□□□□□ -0.35
Dkk1O54908 Gm15133-201ENSMUST00000139019 843 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Dkk1O54908 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC12.89□□□□□ -0.35
Dkk1O54908 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.89□□□□□ -0.35
Dkk1O54908 Gm8048-201ENSMUST00000182555 996 ntBASIC12.89□□□□□ -0.35
Dkk1O54908 4930590L14Rik-201ENSMUST00000196030 836 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Dkk1O54908 Gm44134-201ENSMUST00000203064 661 ntTSL 2 BASIC12.89□□□□□ -0.35
Dkk1O54908 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Dkk1O54908 9430099M06Rik-201ENSMUST00000210409 742 ntBASIC12.89□□□□□ -0.35
Dkk1O54908 Gm45683-201ENSMUST00000210825 1247 ntBASIC12.89□□□□□ -0.35
Dkk1O54908 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Dkk1O54908 AC155259.1-201ENSMUST00000214794 477 ntBASIC12.89□□□□□ -0.35
Dkk1O54908 Gm40646-202ENSMUST00000218796 793 ntTSL 5 BASIC12.89□□□□□ -0.35
Dkk1O54908 Thap2-203ENSMUST00000218989 527 ntBASIC12.89□□□□□ -0.35
Dkk1O54908 AC154572.2-201ENSMUST00000225105 997 ntBASIC12.89□□□□□ -0.35
Dkk1O54908 CT010506.4-201ENSMUST00000225457 351 ntBASIC12.89□□□□□ -0.35
Dkk1O54908 Vmn1r36-202ENSMUST00000226635 918 ntAPPRIS P2 BASIC12.89□□□□□ -0.35
Dkk1O54908 AC115784.1-201ENSMUST00000227687 1010 ntBASIC12.89□□□□□ -0.35
Dkk1O54908 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Dkk1O54908 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Dkk1O54908 Gm10313-201ENSMUST00000095320 1002 ntBASIC12.89□□□□□ -0.35
Dkk1O54908 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Dkk1O54908 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Dkk1O54908 Olfr181-201ENSMUST00000075361 1391 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Dkk1O54908 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Dkk1O54908 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms