Protein–RNA interactions for Protein: O54751

Crx, Cone-rod homeobox protein, mousemouse

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CrxO54751 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC10.38□□□□□ -0.75
CrxO54751 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
CrxO54751 Gm27194-201ENSMUST00000175753 2936 ntBASIC10.38□□□□□ -0.75
CrxO54751 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CrxO54751 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
CrxO54751 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CrxO54751 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
CrxO54751 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC10.38□□□□□ -0.75
CrxO54751 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
CrxO54751 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
CrxO54751 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
CrxO54751 Mmp14-206ENSMUST00000225641 3238 ntBASIC10.38□□□□□ -0.75
CrxO54751 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
CrxO54751 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
CrxO54751 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
CrxO54751 Tardbp-209ENSMUST00000165113 6495 ntTSL 5 BASIC10.38□□□□□ -0.75
CrxO54751 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
CrxO54751 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
CrxO54751 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC10.38□□□□□ -0.75
CrxO54751 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
CrxO54751 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
CrxO54751 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC10.38□□□□□ -0.75
CrxO54751 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CrxO54751 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CrxO54751 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CrxO54751 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CrxO54751 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC10.38□□□□□ -0.75
CrxO54751 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC10.38□□□□□ -0.75
CrxO54751 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CrxO54751 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CrxO54751 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CrxO54751 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
CrxO54751 Gm7002-201ENSMUST00000221386 2165 ntBASIC10.38□□□□□ -0.75
CrxO54751 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
CrxO54751 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CrxO54751 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
CrxO54751 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
CrxO54751 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC10.37□□□□□ -0.75
CrxO54751 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
CrxO54751 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
CrxO54751 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
CrxO54751 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
CrxO54751 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
CrxO54751 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
CrxO54751 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
CrxO54751 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC10.37□□□□□ -0.75
CrxO54751 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
CrxO54751 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
CrxO54751 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
CrxO54751 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC10.37□□□□□ -0.75
CrxO54751 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
CrxO54751 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
CrxO54751 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
CrxO54751 Gm11355-201ENSMUST00000121120 306 ntBASIC10.37□□□□□ -0.75
CrxO54751 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC10.37□□□□□ -0.75
CrxO54751 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
CrxO54751 Gm43799-201ENSMUST00000201845 579 ntBASIC10.37□□□□□ -0.75
CrxO54751 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC10.37□□□□□ -0.75
CrxO54751 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC10.37□□□□□ -0.75
CrxO54751 AC160980.1-201ENSMUST00000224136 970 ntBASIC10.37□□□□□ -0.75
CrxO54751 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC10.37□□□□□ -0.75
CrxO54751 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
CrxO54751 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
CrxO54751 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
CrxO54751 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
CrxO54751 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
CrxO54751 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
CrxO54751 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
CrxO54751 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC10.37□□□□□ -0.75
CrxO54751 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
CrxO54751 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
CrxO54751 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
CrxO54751 Gm45743-201ENSMUST00000212701 2795 ntBASIC10.37□□□□□ -0.75
CrxO54751 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC10.37□□□□□ -0.75
CrxO54751 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
CrxO54751 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
CrxO54751 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC10.36□□□□□ -0.75
CrxO54751 Tardbp-210ENSMUST00000172073 6513 ntTSL 5 BASIC10.36□□□□□ -0.75
CrxO54751 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
CrxO54751 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
CrxO54751 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
CrxO54751 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
CrxO54751 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CrxO54751 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
CrxO54751 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
CrxO54751 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CrxO54751 AC154262.2-201ENSMUST00000224310 2293 ntBASIC10.36□□□□□ -0.75
CrxO54751 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
CrxO54751 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CrxO54751 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CrxO54751 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CrxO54751 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
CrxO54751 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CrxO54751 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CrxO54751 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
CrxO54751 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
CrxO54751 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CrxO54751 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC10.36□□□□□ -0.75
CrxO54751 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
CrxO54751 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms