Protein–RNA interactions for Protein: O35690

Phox2b, Paired mesoderm homeobox protein 2B, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phox2bO35690 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Phox2bO35690 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
Phox2bO35690 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Phox2bO35690 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Phox2bO35690 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC14.41□□□□□ -0.1
Phox2bO35690 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Phox2bO35690 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Phox2bO35690 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Phox2bO35690 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Phox2bO35690 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Phox2bO35690 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Phox2bO35690 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Phox2bO35690 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Phox2bO35690 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Phox2bO35690 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Phox2bO35690 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Phox2bO35690 Mir692-1-201ENSMUST00000102263 109 ntBASIC14.4□□□□□ -0.1
Phox2bO35690 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Phox2bO35690 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC14.4□□□□□ -0.1
Phox2bO35690 AA619741-201ENSMUST00000195095 646 ntBASIC14.4□□□□□ -0.1
Phox2bO35690 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Phox2bO35690 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC14.4□□□□□ -0.1
Phox2bO35690 AC079680.1-201ENSMUST00000218730 649 ntTSL 5 BASIC14.4□□□□□ -0.1
Phox2bO35690 AC165157.4-201ENSMUST00000220587 139 ntBASIC14.4□□□□□ -0.1
Phox2bO35690 Gm16476-201ENSMUST00000221544 139 ntBASIC14.4□□□□□ -0.1
Phox2bO35690 AC155252.1-201ENSMUST00000226462 1208 ntBASIC14.4□□□□□ -0.1
Phox2bO35690 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Phox2bO35690 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Phox2bO35690 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Phox2bO35690 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.4□□□□□ -0.1
Phox2bO35690 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Phox2bO35690 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Phox2bO35690 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Phox2bO35690 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Phox2bO35690 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Phox2bO35690 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.4□□□□□ -0.1
Phox2bO35690 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Phox2bO35690 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Phox2bO35690 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Phox2bO35690 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.39□□□□□ -0.11
Phox2bO35690 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.39□□□□□ -0.11
Phox2bO35690 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Phox2bO35690 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.39□□□□□ -0.11
Phox2bO35690 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC14.39□□□□□ -0.11
Phox2bO35690 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC14.39□□□□□ -0.11
Phox2bO35690 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC14.39□□□□□ -0.11
Phox2bO35690 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC14.39□□□□□ -0.11
Phox2bO35690 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC14.39□□□□□ -0.11
Phox2bO35690 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Phox2bO35690 Gm18595-201ENSMUST00000175736 1068 ntBASIC14.39□□□□□ -0.11
Phox2bO35690 Gm29199-201ENSMUST00000187766 775 ntBASIC14.39□□□□□ -0.11
Phox2bO35690 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC14.39□□□□□ -0.11
Phox2bO35690 Gm18934-201ENSMUST00000216671 1044 ntBASIC14.39□□□□□ -0.11
Phox2bO35690 Olfr258-ps1-202ENSMUST00000218625 1085 ntTSL 5 BASIC14.39□□□□□ -0.11
Phox2bO35690 AC132317.1-201ENSMUST00000227227 962 ntBASIC14.39□□□□□ -0.11
Phox2bO35690 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Phox2bO35690 Vmn1r34-201ENSMUST00000074381 930 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Phox2bO35690 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Phox2bO35690 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Phox2bO35690 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Phox2bO35690 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Phox2bO35690 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.39□□□□□ -0.11
Phox2bO35690 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Phox2bO35690 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Phox2bO35690 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Phox2bO35690 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Phox2bO35690 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Phox2bO35690 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Phox2bO35690 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
Phox2bO35690 Pbld1-201ENSMUST00000020266 2407 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
Phox2bO35690 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Phox2bO35690 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Phox2bO35690 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.38□□□□□ -0.11
Phox2bO35690 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Phox2bO35690 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.38□□□□□ -0.11
Phox2bO35690 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.38□□□□□ -0.11
Phox2bO35690 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Phox2bO35690 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
Phox2bO35690 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Phox2bO35690 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Phox2bO35690 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Phox2bO35690 Gm12341-201ENSMUST00000119724 503 ntBASIC14.38□□□□□ -0.11
Phox2bO35690 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Phox2bO35690 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC14.38□□□□□ -0.11
Phox2bO35690 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Phox2bO35690 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC14.38□□□□□ -0.11
Phox2bO35690 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC14.38□□□□□ -0.11
Phox2bO35690 Gm42726-201ENSMUST00000202274 1286 ntTSL 5 BASIC14.38□□□□□ -0.11
Phox2bO35690 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC14.38□□□□□ -0.11
Phox2bO35690 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Phox2bO35690 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Phox2bO35690 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Phox2bO35690 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Phox2bO35690 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Phox2bO35690 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Phox2bO35690 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Phox2bO35690 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Phox2bO35690 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Phox2bO35690 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Phox2bO35690 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms