Protein–RNA interactions for Protein: O35218

Cpsf2, Cleavage and polyadenylation specificity factor subunit 2, mousemouse

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf2O35218 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cpsf2O35218 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cpsf2O35218 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cpsf2O35218 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cpsf2O35218 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cpsf2O35218 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cpsf2O35218 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Cpsf2O35218 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Cpsf2O35218 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC15.26■□□□□ 0.03
Cpsf2O35218 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cpsf2O35218 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cpsf2O35218 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cpsf2O35218 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cpsf2O35218 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC15.26■□□□□ 0.03
Cpsf2O35218 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cpsf2O35218 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cpsf2O35218 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cpsf2O35218 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cpsf2O35218 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cpsf2O35218 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cpsf2O35218 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cpsf2O35218 Gm19863-201ENSMUST00000192480 2218 ntBASIC15.25■□□□□ 0.03
Cpsf2O35218 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cpsf2O35218 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cpsf2O35218 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cpsf2O35218 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cpsf2O35218 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cpsf2O35218 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cpsf2O35218 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cpsf2O35218 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cpsf2O35218 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cpsf2O35218 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Cpsf2O35218 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cpsf2O35218 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cpsf2O35218 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cpsf2O35218 Gm5479-201ENSMUST00000160578 435 ntBASIC15.25■□□□□ 0.03
Cpsf2O35218 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC15.25■□□□□ 0.03
Cpsf2O35218 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cpsf2O35218 Klk2-ps-201ENSMUST00000205342 571 ntBASIC15.25■□□□□ 0.03
Cpsf2O35218 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cpsf2O35218 AC133598.3-202ENSMUST00000224219 531 ntBASIC15.25■□□□□ 0.03
Cpsf2O35218 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cpsf2O35218 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cpsf2O35218 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cpsf2O35218 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cpsf2O35218 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cpsf2O35218 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cpsf2O35218 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cpsf2O35218 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cpsf2O35218 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cpsf2O35218 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cpsf2O35218 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cpsf2O35218 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Cpsf2O35218 Gm12892-201ENSMUST00000117367 1146 ntBASIC15.24■□□□□ 0.03
Cpsf2O35218 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cpsf2O35218 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Cpsf2O35218 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC15.24■□□□□ 0.03
Cpsf2O35218 CT025555.1-201ENSMUST00000225901 1217 ntBASIC15.24■□□□□ 0.03
Cpsf2O35218 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cpsf2O35218 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cpsf2O35218 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cpsf2O35218 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cpsf2O35218 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cpsf2O35218 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cpsf2O35218 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cpsf2O35218 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cpsf2O35218 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cpsf2O35218 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cpsf2O35218 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cpsf2O35218 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cpsf2O35218 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cpsf2O35218 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cpsf2O35218 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cpsf2O35218 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cpsf2O35218 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cpsf2O35218 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cpsf2O35218 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cpsf2O35218 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cpsf2O35218 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC15.23■□□□□ 0.03
Cpsf2O35218 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cpsf2O35218 Gm44492-201ENSMUST00000197012 141 ntBASIC15.23■□□□□ 0.03
Cpsf2O35218 Gm44945-201ENSMUST00000206764 1187 ntBASIC15.23■□□□□ 0.03
Cpsf2O35218 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cpsf2O35218 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cpsf2O35218 AC164107.1-201ENSMUST00000227730 2161 ntBASIC15.23■□□□□ 0.03
Cpsf2O35218 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Cpsf2O35218 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cpsf2O35218 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cpsf2O35218 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cpsf2O35218 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cpsf2O35218 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cpsf2O35218 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
Cpsf2O35218 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cpsf2O35218 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cpsf2O35218 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cpsf2O35218 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cpsf2O35218 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cpsf2O35218 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cpsf2O35218 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Cpsf2O35218 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms