Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Gm21901-201ENSMUST00000189568 696 ntBASIC13.42□□□□□ -0.26
Cx3cl1O35188 Gm29424-201ENSMUST00000189716 696 ntBASIC13.42□□□□□ -0.26
Cx3cl1O35188 Gm28599-201ENSMUST00000189838 694 ntBASIC13.42□□□□□ -0.26
Cx3cl1O35188 Gm21867-201ENSMUST00000189917 696 ntBASIC13.42□□□□□ -0.26
Cx3cl1O35188 Gm29269-201ENSMUST00000190087 696 ntBASIC13.42□□□□□ -0.26
Cx3cl1O35188 Gm21722-201ENSMUST00000190153 696 ntBASIC13.42□□□□□ -0.26
Cx3cl1O35188 Gm28423-201ENSMUST00000190701 696 ntBASIC13.42□□□□□ -0.26
Cx3cl1O35188 Gm21899-201ENSMUST00000190745 696 ntBASIC13.42□□□□□ -0.26
Cx3cl1O35188 Gm21910-201ENSMUST00000191163 696 ntBASIC13.42□□□□□ -0.26
Cx3cl1O35188 Gm21849-201ENSMUST00000191571 696 ntBASIC13.42□□□□□ -0.26
Cx3cl1O35188 Gm28678-201ENSMUST00000191593 696 ntBASIC13.42□□□□□ -0.26
Cx3cl1O35188 Gm20910-201ENSMUST00000193268 696 ntBASIC13.42□□□□□ -0.26
Cx3cl1O35188 Gm21871-201ENSMUST00000194621 696 ntBASIC13.42□□□□□ -0.26
Cx3cl1O35188 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cx3cl1O35188 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cx3cl1O35188 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cx3cl1O35188 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC13.42□□□□□ -0.26
Cx3cl1O35188 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cx3cl1O35188 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cx3cl1O35188 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cx3cl1O35188 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.42□□□□□ -0.26
Cx3cl1O35188 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cx3cl1O35188 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cx3cl1O35188 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC13.42□□□□□ -0.26
Cx3cl1O35188 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cx3cl1O35188 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cx3cl1O35188 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cx3cl1O35188 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cx3cl1O35188 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cx3cl1O35188 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cx3cl1O35188 AC154767.3-201ENSMUST00000225150 1342 ntBASIC13.41□□□□□ -0.26
Cx3cl1O35188 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cx3cl1O35188 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.41□□□□□ -0.26
Cx3cl1O35188 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cx3cl1O35188 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
Cx3cl1O35188 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Cx3cl1O35188 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cx3cl1O35188 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Cx3cl1O35188 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cx3cl1O35188 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC13.41□□□□□ -0.26
Cx3cl1O35188 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cx3cl1O35188 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cx3cl1O35188 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cx3cl1O35188 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cx3cl1O35188 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cx3cl1O35188 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cx3cl1O35188 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cx3cl1O35188 Gm15920-201ENSMUST00000118998 402 ntBASIC13.41□□□□□ -0.26
Cx3cl1O35188 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cx3cl1O35188 Gm10275-202ENSMUST00000168697 495 ntBASIC13.41□□□□□ -0.26
Cx3cl1O35188 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cx3cl1O35188 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Cx3cl1O35188 Gm10275-201ENSMUST00000092620 635 ntBASIC13.41□□□□□ -0.26
Cx3cl1O35188 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cx3cl1O35188 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cx3cl1O35188 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cx3cl1O35188 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Cx3cl1O35188 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Cx3cl1O35188 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cx3cl1O35188 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cx3cl1O35188 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Cx3cl1O35188 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cx3cl1O35188 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cx3cl1O35188 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cx3cl1O35188 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC13.4□□□□□ -0.26
Cx3cl1O35188 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cx3cl1O35188 Gm9856-201ENSMUST00000217077 2578 ntBASIC13.4□□□□□ -0.26
Cx3cl1O35188 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cx3cl1O35188 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cx3cl1O35188 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cx3cl1O35188 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cx3cl1O35188 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC13.4□□□□□ -0.26
Cx3cl1O35188 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC13.4□□□□□ -0.26
Cx3cl1O35188 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cx3cl1O35188 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cx3cl1O35188 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cx3cl1O35188 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Cx3cl1O35188 Mir6956-201ENSMUST00000183598 62 ntBASIC13.4□□□□□ -0.26
Cx3cl1O35188 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC13.4□□□□□ -0.26
Cx3cl1O35188 Gm44872-201ENSMUST00000207864 420 ntBASIC13.4□□□□□ -0.26
Cx3cl1O35188 AC123645.1-201ENSMUST00000228469 605 ntBASIC13.4□□□□□ -0.26
Cx3cl1O35188 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cx3cl1O35188 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cx3cl1O35188 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cx3cl1O35188 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cx3cl1O35188 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Cx3cl1O35188 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cx3cl1O35188 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cx3cl1O35188 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cx3cl1O35188 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cx3cl1O35188 Fbxl12-205ENSMUST00000140702 1555 ntBASIC13.4□□□□□ -0.26
Cx3cl1O35188 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cx3cl1O35188 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cx3cl1O35188 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cx3cl1O35188 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cx3cl1O35188 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Cx3cl1O35188 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cx3cl1O35188 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
Cx3cl1O35188 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cx3cl1O35188 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms