Protein–RNA interactions for Protein: O08602

Raet1a, Retinoic acid early-inducible protein 1-alpha, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1aO08602 Ssr1-204ENSMUST00000225319 1610 ntBASIC12.65□□□□□ -0.38
Raet1aO08602 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Raet1aO08602 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Raet1aO08602 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Raet1aO08602 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Raet1aO08602 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Raet1aO08602 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Raet1aO08602 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Raet1aO08602 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.39
Raet1aO08602 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Raet1aO08602 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Raet1aO08602 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Raet1aO08602 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Raet1aO08602 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Raet1aO08602 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Raet1aO08602 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Raet1aO08602 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC12.64□□□□□ -0.39
Raet1aO08602 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Raet1aO08602 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Raet1aO08602 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Raet1aO08602 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC12.64□□□□□ -0.39
Raet1aO08602 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Raet1aO08602 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Raet1aO08602 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Raet1aO08602 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Raet1aO08602 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC12.64□□□□□ -0.39
Raet1aO08602 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
Raet1aO08602 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Raet1aO08602 Gm29310-201ENSMUST00000185468 696 ntBASIC12.64□□□□□ -0.39
Raet1aO08602 Gm21825-201ENSMUST00000185728 696 ntBASIC12.64□□□□□ -0.39
Raet1aO08602 Gm29109-201ENSMUST00000185895 696 ntBASIC12.64□□□□□ -0.39
Raet1aO08602 Gm21896-201ENSMUST00000186520 696 ntBASIC12.64□□□□□ -0.39
Raet1aO08602 Gm21873-201ENSMUST00000186728 696 ntBASIC12.64□□□□□ -0.39
Raet1aO08602 Gm21794-201ENSMUST00000187056 696 ntBASIC12.64□□□□□ -0.39
Raet1aO08602 Gm21880-201ENSMUST00000187275 696 ntBASIC12.64□□□□□ -0.39
Raet1aO08602 Gm21826-201ENSMUST00000187451 696 ntBASIC12.64□□□□□ -0.39
Raet1aO08602 Gm21198-201ENSMUST00000188393 696 ntBASIC12.64□□□□□ -0.39
Raet1aO08602 Gm21749-201ENSMUST00000189343 696 ntBASIC12.64□□□□□ -0.39
Raet1aO08602 Gm21901-201ENSMUST00000189568 696 ntBASIC12.64□□□□□ -0.39
Raet1aO08602 Gm29424-201ENSMUST00000189716 696 ntBASIC12.64□□□□□ -0.39
Raet1aO08602 Gm28599-201ENSMUST00000189838 694 ntBASIC12.64□□□□□ -0.39
Raet1aO08602 Gm21867-201ENSMUST00000189917 696 ntBASIC12.64□□□□□ -0.39
Raet1aO08602 Gm29269-201ENSMUST00000190087 696 ntBASIC12.64□□□□□ -0.39
Raet1aO08602 Gm21722-201ENSMUST00000190153 696 ntBASIC12.64□□□□□ -0.39
Raet1aO08602 Gm28423-201ENSMUST00000190701 696 ntBASIC12.64□□□□□ -0.39
Raet1aO08602 Gm21899-201ENSMUST00000190745 696 ntBASIC12.64□□□□□ -0.39
Raet1aO08602 Gm21910-201ENSMUST00000191163 696 ntBASIC12.64□□□□□ -0.39
Raet1aO08602 Gm21849-201ENSMUST00000191571 696 ntBASIC12.64□□□□□ -0.39
Raet1aO08602 Gm28678-201ENSMUST00000191593 696 ntBASIC12.64□□□□□ -0.39
Raet1aO08602 Gm20910-201ENSMUST00000193268 696 ntBASIC12.64□□□□□ -0.39
Raet1aO08602 Gm21871-201ENSMUST00000194621 696 ntBASIC12.64□□□□□ -0.39
Raet1aO08602 Gm44335-201ENSMUST00000196879 141 ntBASIC12.64□□□□□ -0.39
Raet1aO08602 Gm44297-201ENSMUST00000198304 141 ntBASIC12.64□□□□□ -0.39
Raet1aO08602 Gm44346-201ENSMUST00000198851 141 ntBASIC12.64□□□□□ -0.39
Raet1aO08602 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Raet1aO08602 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Raet1aO08602 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Raet1aO08602 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Raet1aO08602 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Raet1aO08602 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Raet1aO08602 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Raet1aO08602 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Raet1aO08602 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC12.64□□□□□ -0.39
Raet1aO08602 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Raet1aO08602 Gm21451-201ENSMUST00000111062 2775 ntBASIC12.64□□□□□ -0.39
Raet1aO08602 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Raet1aO08602 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Raet1aO08602 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Raet1aO08602 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Raet1aO08602 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
Raet1aO08602 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Raet1aO08602 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Raet1aO08602 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Raet1aO08602 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Raet1aO08602 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Raet1aO08602 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Raet1aO08602 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Raet1aO08602 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Raet1aO08602 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Raet1aO08602 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Raet1aO08602 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Raet1aO08602 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Raet1aO08602 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC12.63□□□□□ -0.39
Raet1aO08602 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC12.63□□□□□ -0.39
Raet1aO08602 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Raet1aO08602 Gm8116-201ENSMUST00000182917 1201 ntBASIC12.63□□□□□ -0.39
Raet1aO08602 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC12.63□□□□□ -0.39
Raet1aO08602 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Raet1aO08602 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Raet1aO08602 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Raet1aO08602 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Raet1aO08602 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Raet1aO08602 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Raet1aO08602 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Raet1aO08602 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Raet1aO08602 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Raet1aO08602 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Raet1aO08602 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Raet1aO08602 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC12.63□□□□□ -0.39
Raet1aO08602 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms