Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Shisa8J3QNX5 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Shisa8J3QNX5 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC13.01□□□□□ -0.33
Shisa8J3QNX5 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC13.01□□□□□ -0.33
Shisa8J3QNX5 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Shisa8J3QNX5 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Shisa8J3QNX5 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Shisa8J3QNX5 Gm8597-201ENSMUST00000191525 1109 ntBASIC13.01□□□□□ -0.33
Shisa8J3QNX5 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Shisa8J3QNX5 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Shisa8J3QNX5 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Shisa8J3QNX5 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Shisa8J3QNX5 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Shisa8J3QNX5 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Shisa8J3QNX5 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC13.01□□□□□ -0.33
Shisa8J3QNX5 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Shisa8J3QNX5 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC13.01□□□□□ -0.33
Shisa8J3QNX5 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Shisa8J3QNX5 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC13.01□□□□□ -0.33
Shisa8J3QNX5 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Shisa8J3QNX5 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Shisa8J3QNX5 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Shisa8J3QNX5 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Shisa8J3QNX5 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Shisa8J3QNX5 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Shisa8J3QNX5 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Shisa8J3QNX5 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Shisa8J3QNX5 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Shisa8J3QNX5 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Shisa8J3QNX5 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.01□□□□□ -0.33
Shisa8J3QNX5 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Shisa8J3QNX5 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Shisa8J3QNX5 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Shisa8J3QNX5 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Shisa8J3QNX5 Gm44065-201ENSMUST00000203184 3527 ntBASIC13□□□□□ -0.33
Shisa8J3QNX5 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Shisa8J3QNX5 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC13□□□□□ -0.33
Shisa8J3QNX5 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Shisa8J3QNX5 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13□□□□□ -0.33
Shisa8J3QNX5 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Shisa8J3QNX5 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13□□□□□ -0.33
Shisa8J3QNX5 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Shisa8J3QNX5 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Shisa8J3QNX5 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC13□□□□□ -0.33
Shisa8J3QNX5 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13□□□□□ -0.33
Shisa8J3QNX5 Gm6159-201ENSMUST00000191249 1724 ntBASIC13□□□□□ -0.33
Shisa8J3QNX5 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Shisa8J3QNX5 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Shisa8J3QNX5 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Shisa8J3QNX5 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Shisa8J3QNX5 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Shisa8J3QNX5 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Shisa8J3QNX5 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Shisa8J3QNX5 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Shisa8J3QNX5 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC13□□□□□ -0.33
Shisa8J3QNX5 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC13□□□□□ -0.33
Shisa8J3QNX5 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Shisa8J3QNX5 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Shisa8J3QNX5 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC13□□□□□ -0.33
Shisa8J3QNX5 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC13□□□□□ -0.33
Shisa8J3QNX5 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Shisa8J3QNX5 Gm8584-201ENSMUST00000171982 758 ntBASIC13□□□□□ -0.33
Shisa8J3QNX5 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Shisa8J3QNX5 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Shisa8J3QNX5 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC13□□□□□ -0.33
Shisa8J3QNX5 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Shisa8J3QNX5 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Shisa8J3QNX5 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC13□□□□□ -0.33
Shisa8J3QNX5 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Shisa8J3QNX5 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Shisa8J3QNX5 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Shisa8J3QNX5 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Shisa8J3QNX5 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13□□□□□ -0.33
Shisa8J3QNX5 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13□□□□□ -0.33
Shisa8J3QNX5 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Shisa8J3QNX5 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Shisa8J3QNX5 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Shisa8J3QNX5 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Shisa8J3QNX5 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Shisa8J3QNX5 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Shisa8J3QNX5 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Shisa8J3QNX5 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Shisa8J3QNX5 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Shisa8J3QNX5 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Shisa8J3QNX5 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Shisa8J3QNX5 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Shisa8J3QNX5 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Shisa8J3QNX5 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Shisa8J3QNX5 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Shisa8J3QNX5 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Shisa8J3QNX5 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC12.99□□□□□ -0.33
Shisa8J3QNX5 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Shisa8J3QNX5 Gm18856-201ENSMUST00000178096 1374 ntBASIC12.99□□□□□ -0.33
Shisa8J3QNX5 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Shisa8J3QNX5 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Shisa8J3QNX5 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC12.99□□□□□ -0.33
Shisa8J3QNX5 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Shisa8J3QNX5 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Shisa8J3QNX5 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Shisa8J3QNX5 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms