Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Srp54bE9PXC0 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Srp54bE9PXC0 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Srp54bE9PXC0 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Srp54bE9PXC0 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Srp54bE9PXC0 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Srp54bE9PXC0 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC14.03□□□□□ -0.16
Srp54bE9PXC0 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Srp54bE9PXC0 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Srp54bE9PXC0 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Srp54bE9PXC0 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Srp54bE9PXC0 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Srp54bE9PXC0 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Srp54bE9PXC0 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Srp54bE9PXC0 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Srp54bE9PXC0 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.03□□□□□ -0.16
Srp54bE9PXC0 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Srp54bE9PXC0 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC14.03□□□□□ -0.16
Srp54bE9PXC0 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC14.03□□□□□ -0.16
Srp54bE9PXC0 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC14.03□□□□□ -0.16
Srp54bE9PXC0 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC14.03□□□□□ -0.16
Srp54bE9PXC0 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Srp54bE9PXC0 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC14.03□□□□□ -0.16
Srp54bE9PXC0 Gm31326-201ENSMUST00000191856 1048 ntBASIC14.03□□□□□ -0.16
Srp54bE9PXC0 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Srp54bE9PXC0 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Srp54bE9PXC0 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC14.03□□□□□ -0.16
Srp54bE9PXC0 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Srp54bE9PXC0 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Srp54bE9PXC0 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Srp54bE9PXC0 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Srp54bE9PXC0 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Srp54bE9PXC0 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Srp54bE9PXC0 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Srp54bE9PXC0 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Srp54bE9PXC0 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Srp54bE9PXC0 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Srp54bE9PXC0 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Srp54bE9PXC0 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Srp54bE9PXC0 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Srp54bE9PXC0 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Srp54bE9PXC0 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Srp54bE9PXC0 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Srp54bE9PXC0 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Srp54bE9PXC0 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Srp54bE9PXC0 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Srp54bE9PXC0 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Srp54bE9PXC0 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC14.02□□□□□ -0.17
Srp54bE9PXC0 Gm15957-201ENSMUST00000118893 974 ntBASIC14.02□□□□□ -0.17
Srp54bE9PXC0 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC14.02□□□□□ -0.17
Srp54bE9PXC0 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC14.02□□□□□ -0.17
Srp54bE9PXC0 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Srp54bE9PXC0 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Srp54bE9PXC0 Gm37917-201ENSMUST00000194711 392 ntBASIC14.02□□□□□ -0.17
Srp54bE9PXC0 Gm18018-201ENSMUST00000198273 408 ntBASIC14.02□□□□□ -0.17
Srp54bE9PXC0 AC153872.1-201ENSMUST00000199539 128 ntBASIC14.02□□□□□ -0.17
Srp54bE9PXC0 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Srp54bE9PXC0 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC14.02□□□□□ -0.17
Srp54bE9PXC0 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Srp54bE9PXC0 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Srp54bE9PXC0 Gm15823-201ENSMUST00000064305 670 ntBASIC14.02□□□□□ -0.17
Srp54bE9PXC0 Gm6180-201ENSMUST00000065243 498 ntBASIC14.02□□□□□ -0.17
Srp54bE9PXC0 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Srp54bE9PXC0 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Srp54bE9PXC0 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Srp54bE9PXC0 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Srp54bE9PXC0 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Srp54bE9PXC0 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.02□□□□□ -0.17
Srp54bE9PXC0 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Srp54bE9PXC0 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Srp54bE9PXC0 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Srp54bE9PXC0 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Srp54bE9PXC0 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Srp54bE9PXC0 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Srp54bE9PXC0 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Srp54bE9PXC0 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Srp54bE9PXC0 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Srp54bE9PXC0 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Srp54bE9PXC0 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Srp54bE9PXC0 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.01□□□□□ -0.17
Srp54bE9PXC0 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Srp54bE9PXC0 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Srp54bE9PXC0 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Srp54bE9PXC0 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Srp54bE9PXC0 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Srp54bE9PXC0 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.01□□□□□ -0.17
Srp54bE9PXC0 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Srp54bE9PXC0 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC14.01□□□□□ -0.17
Srp54bE9PXC0 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC14.01□□□□□ -0.17
Srp54bE9PXC0 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Srp54bE9PXC0 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Srp54bE9PXC0 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Srp54bE9PXC0 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Srp54bE9PXC0 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Srp54bE9PXC0 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Srp54bE9PXC0 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Srp54bE9PXC0 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Srp54bE9PXC0 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Srp54bE9PXC0 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC14.01□□□□□ -0.17
Srp54bE9PXC0 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 73.5 ms