Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Gm28043E0CXC2 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Gm28043E0CXC2 Gm5177-201ENSMUST00000183092 997 ntBASIC14.32□□□□□ -0.12
Gm28043E0CXC2 Gm7229-201ENSMUST00000214719 1007 ntBASIC14.32□□□□□ -0.12
Gm28043E0CXC2 AC154532.1-201ENSMUST00000227860 965 ntBASIC14.32□□□□□ -0.12
Gm28043E0CXC2 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm28043E0CXC2 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm28043E0CXC2 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm28043E0CXC2 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm28043E0CXC2 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm28043E0CXC2 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Gm28043E0CXC2 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm28043E0CXC2 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm28043E0CXC2 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Gm28043E0CXC2 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm28043E0CXC2 Ntrk2-208ENSMUST00000225583 2719 ntBASIC14.32□□□□□ -0.12
Gm28043E0CXC2 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm28043E0CXC2 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Gm28043E0CXC2 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC14.32□□□□□ -0.12
Gm28043E0CXC2 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm28043E0CXC2 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Gm28043E0CXC2 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm28043E0CXC2 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Gm28043E0CXC2 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Gm28043E0CXC2 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm28043E0CXC2 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm28043E0CXC2 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm28043E0CXC2 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm28043E0CXC2 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Gm28043E0CXC2 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm28043E0CXC2 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Gm28043E0CXC2 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Gm28043E0CXC2 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm28043E0CXC2 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Gm28043E0CXC2 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm28043E0CXC2 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm28043E0CXC2 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC14.31□□□□□ -0.12
Gm28043E0CXC2 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm28043E0CXC2 Gm11779-201ENSMUST00000118541 368 ntBASIC14.31□□□□□ -0.12
Gm28043E0CXC2 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC14.31□□□□□ -0.12
Gm28043E0CXC2 Gm27525-201ENSMUST00000184465 107 ntBASIC14.31□□□□□ -0.12
Gm28043E0CXC2 Gm45683-201ENSMUST00000210825 1247 ntBASIC14.31□□□□□ -0.12
Gm28043E0CXC2 Thap2-203ENSMUST00000218989 527 ntBASIC14.31□□□□□ -0.12
Gm28043E0CXC2 AC154572.2-201ENSMUST00000225105 997 ntBASIC14.31□□□□□ -0.12
Gm28043E0CXC2 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC14.31□□□□□ -0.12
Gm28043E0CXC2 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Gm28043E0CXC2 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm28043E0CXC2 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm28043E0CXC2 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
Gm28043E0CXC2 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm28043E0CXC2 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14.31□□□□□ -0.12
Gm28043E0CXC2 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm28043E0CXC2 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm28043E0CXC2 Gm26513-201ENSMUST00000181802 2489 ntBASIC14.31□□□□□ -0.12
Gm28043E0CXC2 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm28043E0CXC2 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Gm28043E0CXC2 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm28043E0CXC2 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm28043E0CXC2 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Gm28043E0CXC2 Gm43056-201ENSMUST00000197865 2791 ntBASIC14.3□□□□□ -0.12
Gm28043E0CXC2 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm28043E0CXC2 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm28043E0CXC2 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
Gm28043E0CXC2 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Gm28043E0CXC2 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm28043E0CXC2 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm28043E0CXC2 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Gm28043E0CXC2 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm28043E0CXC2 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC14.3□□□□□ -0.12
Gm28043E0CXC2 Gm12260-201ENSMUST00000122447 411 ntBASIC14.3□□□□□ -0.12
Gm28043E0CXC2 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm28043E0CXC2 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm28043E0CXC2 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm28043E0CXC2 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm28043E0CXC2 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Gm28043E0CXC2 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Gm28043E0CXC2 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Gm28043E0CXC2 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm28043E0CXC2 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm28043E0CXC2 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm28043E0CXC2 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Gm28043E0CXC2 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm28043E0CXC2 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm28043E0CXC2 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Gm28043E0CXC2 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm28043E0CXC2 Gm38197-201ENSMUST00000192320 2122 ntBASIC14.29□□□□□ -0.12
Gm28043E0CXC2 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC14.29□□□□□ -0.12
Gm28043E0CXC2 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm28043E0CXC2 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Gm28043E0CXC2 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Gm28043E0CXC2 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC14.29□□□□□ -0.12
Gm28043E0CXC2 Gm15467-201ENSMUST00000120582 445 ntBASIC14.29□□□□□ -0.12
Gm28043E0CXC2 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.29□□□□□ -0.12
Gm28043E0CXC2 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC14.29□□□□□ -0.12
Gm28043E0CXC2 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC14.29□□□□□ -0.12
Gm28043E0CXC2 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Gm28043E0CXC2 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC14.29□□□□□ -0.12
Gm28043E0CXC2 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm28043E0CXC2 AC174742.1-201ENSMUST00000218272 304 ntBASIC14.29□□□□□ -0.12
Gm28043E0CXC2 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms