Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC12.75□□□□□ -0.37
Shank1D3YZU1 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.75□□□□□ -0.37
Shank1D3YZU1 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Shank1D3YZU1 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Shank1D3YZU1 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Shank1D3YZU1 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Shank1D3YZU1 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Shank1D3YZU1 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC12.75□□□□□ -0.37
Shank1D3YZU1 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12.75□□□□□ -0.37
Shank1D3YZU1 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Shank1D3YZU1 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
Shank1D3YZU1 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Shank1D3YZU1 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Shank1D3YZU1 Mxra8os-201ENSMUST00000097740 687 ntBASIC12.75□□□□□ -0.37
Shank1D3YZU1 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC12.75□□□□□ -0.37
Shank1D3YZU1 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Shank1D3YZU1 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Shank1D3YZU1 Gm42690-201ENSMUST00000197921 1836 ntBASIC12.75□□□□□ -0.37
Shank1D3YZU1 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Shank1D3YZU1 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.75□□□□□ -0.37
Shank1D3YZU1 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Shank1D3YZU1 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Shank1D3YZU1 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Shank1D3YZU1 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Shank1D3YZU1 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Shank1D3YZU1 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Shank1D3YZU1 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Shank1D3YZU1 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Shank1D3YZU1 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Shank1D3YZU1 Gm5049-201ENSMUST00000195878 1590 ntBASIC12.75□□□□□ -0.37
Shank1D3YZU1 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Shank1D3YZU1 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Shank1D3YZU1 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Shank1D3YZU1 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC12.75□□□□□ -0.37
Shank1D3YZU1 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shank1D3YZU1 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Shank1D3YZU1 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12.74□□□□□ -0.37
Shank1D3YZU1 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shank1D3YZU1 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Shank1D3YZU1 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shank1D3YZU1 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC12.74□□□□□ -0.37
Shank1D3YZU1 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Shank1D3YZU1 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Shank1D3YZU1 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shank1D3YZU1 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Shank1D3YZU1 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shank1D3YZU1 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shank1D3YZU1 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shank1D3YZU1 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shank1D3YZU1 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Shank1D3YZU1 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
Shank1D3YZU1 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC12.74□□□□□ -0.37
Shank1D3YZU1 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC12.74□□□□□ -0.37
Shank1D3YZU1 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Shank1D3YZU1 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shank1D3YZU1 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Shank1D3YZU1 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Shank1D3YZU1 Gm11661-201ENSMUST00000121761 1327 ntBASIC12.74□□□□□ -0.37
Shank1D3YZU1 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shank1D3YZU1 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Shank1D3YZU1 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shank1D3YZU1 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shank1D3YZU1 Gm8242-201ENSMUST00000193029 1420 ntBASIC12.73□□□□□ -0.37
Shank1D3YZU1 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Shank1D3YZU1 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Shank1D3YZU1 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shank1D3YZU1 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC12.73□□□□□ -0.37
Shank1D3YZU1 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Shank1D3YZU1 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shank1D3YZU1 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shank1D3YZU1 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shank1D3YZU1 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shank1D3YZU1 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Shank1D3YZU1 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC12.73□□□□□ -0.37
Shank1D3YZU1 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shank1D3YZU1 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shank1D3YZU1 Gm27839-201ENSMUST00000184242 106 ntBASIC12.73□□□□□ -0.37
Shank1D3YZU1 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC12.73□□□□□ -0.37
Shank1D3YZU1 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC12.73□□□□□ -0.37
Shank1D3YZU1 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shank1D3YZU1 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shank1D3YZU1 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shank1D3YZU1 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shank1D3YZU1 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Shank1D3YZU1 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shank1D3YZU1 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shank1D3YZU1 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shank1D3YZU1 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Shank1D3YZU1 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shank1D3YZU1 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.73□□□□□ -0.37
Shank1D3YZU1 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Shank1D3YZU1 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shank1D3YZU1 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
Shank1D3YZU1 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shank1D3YZU1 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shank1D3YZU1 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC12.73□□□□□ -0.37
Shank1D3YZU1 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shank1D3YZU1 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Shank1D3YZU1 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shank1D3YZU1 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms