Protein–RNA interactions for Protein: A4IF42

Gm4559, ENSMUSG00000056885 protein (Fragment), mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm4559A4IF42 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
Gm4559A4IF42 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
Gm4559A4IF42 Gm7823-201ENSMUST00000120761 1623 ntBASIC3.01□□□□□ -1.93
Gm4559A4IF42 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
Gm4559A4IF42 Kat6b-ps2-201ENSMUST00000188339 1600 ntBASIC3.01□□□□□ -1.93
Gm4559A4IF42 Gm42671-201ENSMUST00000198013 1604 ntBASIC3.01□□□□□ -1.93
Gm4559A4IF42 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
Gm4559A4IF42 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
Gm4559A4IF42 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC3.01□□□□□ -1.93
Gm4559A4IF42 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC3□□□□□ -1.93
Gm4559A4IF42 Gm19136-201ENSMUST00000190706 2067 ntBASIC3□□□□□ -1.93
Gm4559A4IF42 Gm38302-201ENSMUST00000191676 2076 ntBASIC3□□□□□ -1.93
Gm4559A4IF42 AC117648.1-201ENSMUST00000219777 2510 ntBASIC3□□□□□ -1.93
Gm4559A4IF42 Foxp2-209ENSMUST00000131414 1381 ntTSL 5 BASIC3□□□□□ -1.93
Gm4559A4IF42 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Gm4559A4IF42 AC155710.1-201ENSMUST00000219913 1353 ntBASIC3□□□□□ -1.93
Gm4559A4IF42 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Gm4559A4IF42 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC3□□□□□ -1.93
Gm4559A4IF42 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Gm4559A4IF42 Gm37887-201ENSMUST00000192752 2716 ntBASIC3□□□□□ -1.93
Gm4559A4IF42 Gm15080-201ENSMUST00000112804 2029 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Gm4559A4IF42 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC3□□□□□ -1.93
Gm4559A4IF42 AC115891.3-201ENSMUST00000219161 2472 ntBASIC3□□□□□ -1.93
Gm4559A4IF42 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC3□□□□□ -1.93
Gm4559A4IF42 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
Gm4559A4IF42 Gm11685-201ENSMUST00000141559 1332 ntTSL 1 (best) BASIC3□□□□□ -1.93
Gm4559A4IF42 AC115891.2-201ENSMUST00000218448 1341 ntBASIC3□□□□□ -1.93
Gm4559A4IF42 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Gm4559A4IF42 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Gm4559A4IF42 Hsd3b3-202ENSMUST00000094050 1327 ntTSL 5 BASIC3□□□□□ -1.93
Gm4559A4IF42 Gm136-201ENSMUST00000095129 1311 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Gm4559A4IF42 Lmo3-207ENSMUST00000163065 2425 ntTSL 3 BASIC3□□□□□ -1.93
Gm4559A4IF42 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Gm4559A4IF42 AC160405.2-201ENSMUST00000219008 1987 ntBASIC3□□□□□ -1.93
Gm4559A4IF42 Ppp1r1c-202ENSMUST00000090760 2644 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Gm4559A4IF42 1700017N19Rik-203ENSMUST00000187119 1524 ntTSL 5 BASIC3□□□□□ -1.93
Gm4559A4IF42 Dynlt3-201ENSMUST00000033519 2176 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Gm4559A4IF42 AC129308.2-203ENSMUST00000224109 2385 ntBASIC3□□□□□ -1.93
Gm4559A4IF42 Nae1-211ENSMUST00000162466 1735 ntTSL 5 BASIC3□□□□□ -1.93
Gm4559A4IF42 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Gm4559A4IF42 Olfr1242-204ENSMUST00000216001 2569 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Gm4559A4IF42 Gm20667-201ENSMUST00000175674 1930 ntBASIC3□□□□□ -1.93
Gm4559A4IF42 Olfr355-201ENSMUST00000100147 933 ntAPPRIS P1 BASIC3□□□□□ -1.93
Gm4559A4IF42 Gm10376-201ENSMUST00000100694 555 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
Gm4559A4IF42 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC3□□□□□ -1.93
Gm4559A4IF42 Lrrc51-207ENSMUST00000106967 675 ntTSL 3 BASIC3□□□□□ -1.93
Gm4559A4IF42 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC3□□□□□ -1.93
Gm4559A4IF42 Ceacam13-202ENSMUST00000108488 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
Gm4559A4IF42 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC3□□□□□ -1.93
Gm4559A4IF42 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
Gm4559A4IF42 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC3□□□□□ -1.93
Gm4559A4IF42 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC3□□□□□ -1.93
Gm4559A4IF42 Gm13036-201ENSMUST00000117799 748 ntBASIC3□□□□□ -1.93
Gm4559A4IF42 Gm13600-201ENSMUST00000117949 744 ntBASIC3□□□□□ -1.93
Gm4559A4IF42 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC3□□□□□ -1.93
Gm4559A4IF42 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC3□□□□□ -1.93
Gm4559A4IF42 Gm11262-201ENSMUST00000119326 833 ntBASIC3□□□□□ -1.93
Gm4559A4IF42 Gm9431-201ENSMUST00000119765 1051 ntBASIC3□□□□□ -1.93
Gm4559A4IF42 Vmn1r-ps103-201ENSMUST00000120171 893 ntBASIC3□□□□□ -1.93
Gm4559A4IF42 Gm11701-201ENSMUST00000121277 1142 ntBASIC3□□□□□ -1.93
Gm4559A4IF42 Gm12163-201ENSMUST00000121597 389 ntBASIC3□□□□□ -1.93
Gm4559A4IF42 Gm14768-201ENSMUST00000122126 678 ntBASIC3□□□□□ -1.93
Gm4559A4IF42 Mettl4-ps1-201ENSMUST00000127676 1272 ntBASIC3□□□□□ -1.93
Gm4559A4IF42 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Gm4559A4IF42 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC3□□□□□ -1.93
Gm4559A4IF42 Zfp931-204ENSMUST00000131702 704 ntTSL 3 BASIC3□□□□□ -1.93
Gm4559A4IF42 Gm16157-202ENSMUST00000135564 1082 ntTSL 1 (best) BASIC3□□□□□ -1.93
Gm4559A4IF42 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC3□□□□□ -1.93
Gm4559A4IF42 Gm15938-201ENSMUST00000150079 635 ntTSL 1 (best) BASIC3□□□□□ -1.93
Gm4559A4IF42 4930451E10Rik-202ENSMUST00000152292 557 ntTSL 3 BASIC3□□□□□ -1.93
Gm4559A4IF42 Gm14009-201ENSMUST00000152439 656 ntTSL 1 (best) BASIC3□□□□□ -1.93
Gm4559A4IF42 AU019990-203ENSMUST00000153028 888 ntTSL 1 (best) BASIC3□□□□□ -1.93
Gm4559A4IF42 Gm23819-201ENSMUST00000158744 109 ntBASIC3□□□□□ -1.93
Gm4559A4IF42 Gm8185-201ENSMUST00000160999 669 ntBASIC3□□□□□ -1.93
Gm4559A4IF42 Gm8550-201ENSMUST00000161621 653 ntBASIC3□□□□□ -1.93
Gm4559A4IF42 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC3□□□□□ -1.93
Gm4559A4IF42 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC3□□□□□ -1.93
Gm4559A4IF42 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Gm4559A4IF42 Gm17521-201ENSMUST00000165345 468 ntAPPRIS P1 BASIC3□□□□□ -1.93
Gm4559A4IF42 Snrpe-204ENSMUST00000166915 503 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Gm4559A4IF42 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC3□□□□□ -1.93
Gm4559A4IF42 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC3□□□□□ -1.93
Gm4559A4IF42 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC3□□□□□ -1.93
Gm4559A4IF42 Vmn1r-ps61-201ENSMUST00000173771 822 ntBASIC3□□□□□ -1.93
Gm4559A4IF42 Gm20389-201ENSMUST00000174217 1006 ntTSL 1 (best) BASIC3□□□□□ -1.93
Gm4559A4IF42 Mir3473a-201ENSMUST00000175011 78 ntBASIC3□□□□□ -1.93
Gm4559A4IF42 Gm3115-202ENSMUST00000177660 618 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
Gm4559A4IF42 Gm6337-203ENSMUST00000177662 618 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
Gm4559A4IF42 Gm3727-202ENSMUST00000178251 618 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
Gm4559A4IF42 Gm17535-201ENSMUST00000178641 672 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Gm4559A4IF42 Kcne3-204ENSMUST00000179842 1059 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Gm4559A4IF42 Gm21729-201ENSMUST00000180058 664 ntBASIC3□□□□□ -1.93
Gm4559A4IF42 Gm26594-201ENSMUST00000180383 1094 ntTSL 1 (best) BASIC3□□□□□ -1.93
Gm4559A4IF42 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC3□□□□□ -1.93
Gm4559A4IF42 Gm27317-201ENSMUST00000183533 95 ntBASIC3□□□□□ -1.93
Gm4559A4IF42 Sult2a6-202ENSMUST00000184731 664 ntTSL 1 (best) BASIC3□□□□□ -1.93
Gm4559A4IF42 1110008L16Rik-206ENSMUST00000184980 888 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
Gm4559A4IF42 Gm27207-201ENSMUST00000184995 878 ntTSL 3 BASIC3□□□□□ -1.93
Gm4559A4IF42 Gm8392-201ENSMUST00000185647 835 ntBASIC3□□□□□ -1.93
Gm4559A4IF42 Trbv22-201ENSMUST00000191697 291 ntBASIC3□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms