Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12□□□□□ -0.49
Col6a4A2AX52 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Col6a4A2AX52 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Col6a4A2AX52 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC12□□□□□ -0.49
Col6a4A2AX52 AC123645.1-201ENSMUST00000228469 605 ntBASIC12□□□□□ -0.49
Col6a4A2AX52 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col6a4A2AX52 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC12□□□□□ -0.49
Col6a4A2AX52 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC12□□□□□ -0.49
Col6a4A2AX52 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Col6a4A2AX52 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC12□□□□□ -0.49
Col6a4A2AX52 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC12□□□□□ -0.49
Col6a4A2AX52 Olfr582-201ENSMUST00000098212 960 ntBASIC12□□□□□ -0.49
Col6a4A2AX52 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
Col6a4A2AX52 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col6a4A2AX52 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col6a4A2AX52 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Col6a4A2AX52 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col6a4A2AX52 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col6a4A2AX52 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC12□□□□□ -0.49
Col6a4A2AX52 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC12□□□□□ -0.49
Col6a4A2AX52 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC12□□□□□ -0.49
Col6a4A2AX52 Gm45667-201ENSMUST00000210380 1316 ntBASIC12□□□□□ -0.49
Col6a4A2AX52 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col6a4A2AX52 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC12□□□□□ -0.49
Col6a4A2AX52 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Col6a4A2AX52 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC12□□□□□ -0.49
Col6a4A2AX52 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC12□□□□□ -0.49
Col6a4A2AX52 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Col6a4A2AX52 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Col6a4A2AX52 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC12□□□□□ -0.49
Col6a4A2AX52 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC12□□□□□ -0.49
Col6a4A2AX52 AC153872.1-201ENSMUST00000199539 128 ntBASIC12□□□□□ -0.49
Col6a4A2AX52 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC12□□□□□ -0.49
Col6a4A2AX52 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC12□□□□□ -0.49
Col6a4A2AX52 AC139580.1-202ENSMUST00000223574 928 ntBASIC12□□□□□ -0.49
Col6a4A2AX52 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col6a4A2AX52 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col6a4A2AX52 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col6a4A2AX52 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC12□□□□□ -0.49
Col6a4A2AX52 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC12□□□□□ -0.49
Col6a4A2AX52 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col6a4A2AX52 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col6a4A2AX52 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col6a4A2AX52 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC12□□□□□ -0.49
Col6a4A2AX52 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col6a4A2AX52 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Col6a4A2AX52 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC12□□□□□ -0.49
Col6a4A2AX52 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col6a4A2AX52 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col6a4A2AX52 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col6a4A2AX52 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col6a4A2AX52 Gm13464-201ENSMUST00000119418 935 ntBASIC11.99□□□□□ -0.49
Col6a4A2AX52 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC11.99□□□□□ -0.49
Col6a4A2AX52 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Col6a4A2AX52 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Col6a4A2AX52 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC11.99□□□□□ -0.49
Col6a4A2AX52 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Col6a4A2AX52 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
Col6a4A2AX52 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC11.99□□□□□ -0.49
Col6a4A2AX52 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Col6a4A2AX52 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col6a4A2AX52 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col6a4A2AX52 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col6a4A2AX52 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col6a4A2AX52 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col6a4A2AX52 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col6a4A2AX52 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Col6a4A2AX52 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col6a4A2AX52 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col6a4A2AX52 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col6a4A2AX52 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Col6a4A2AX52 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col6a4A2AX52 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col6a4A2AX52 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col6a4A2AX52 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col6a4A2AX52 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col6a4A2AX52 Gm13216-201ENSMUST00000117145 591 ntBASIC11.99□□□□□ -0.49
Col6a4A2AX52 Gm38230-201ENSMUST00000193572 1159 ntBASIC11.99□□□□□ -0.49
Col6a4A2AX52 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col6a4A2AX52 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col6a4A2AX52 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col6a4A2AX52 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col6a4A2AX52 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col6a4A2AX52 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col6a4A2AX52 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Col6a4A2AX52 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC11.98□□□□□ -0.49
Col6a4A2AX52 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col6a4A2AX52 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col6a4A2AX52 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col6a4A2AX52 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Col6a4A2AX52 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col6a4A2AX52 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col6a4A2AX52 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Col6a4A2AX52 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC11.98□□□□□ -0.49
Col6a4A2AX52 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col6a4A2AX52 Gm6916-202ENSMUST00000205523 195 ntBASIC11.98□□□□□ -0.49
Col6a4A2AX52 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col6a4A2AX52 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Col6a4A2AX52 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC11.98□□□□□ -0.49
Col6a4A2AX52 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms