Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 AC114543.1-201ENSMUST00000226451 1558 ntBASIC14.87□□□□□ -0.03
Scn1aA2APX8 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scn1aA2APX8 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Scn1aA2APX8 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Scn1aA2APX8 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Scn1aA2APX8 Gm12490-201ENSMUST00000120255 560 ntBASIC14.87□□□□□ -0.03
Scn1aA2APX8 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC14.87□□□□□ -0.03
Scn1aA2APX8 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC14.87□□□□□ -0.03
Scn1aA2APX8 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scn1aA2APX8 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Scn1aA2APX8 Gm45059-201ENSMUST00000205558 1077 ntBASIC14.87□□□□□ -0.03
Scn1aA2APX8 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scn1aA2APX8 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scn1aA2APX8 Gm43205-201ENSMUST00000198622 1968 ntBASIC14.86□□□□□ -0.03
Scn1aA2APX8 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Scn1aA2APX8 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Scn1aA2APX8 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Scn1aA2APX8 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Scn1aA2APX8 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Scn1aA2APX8 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Scn1aA2APX8 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Scn1aA2APX8 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC14.86□□□□□ -0.03
Scn1aA2APX8 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Scn1aA2APX8 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Scn1aA2APX8 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Scn1aA2APX8 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Scn1aA2APX8 Gm9347-201ENSMUST00000211473 1607 ntBASIC14.86□□□□□ -0.03
Scn1aA2APX8 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Scn1aA2APX8 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC14.86□□□□□ -0.03
Scn1aA2APX8 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Scn1aA2APX8 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC14.86□□□□□ -0.03
Scn1aA2APX8 Gm5425-201ENSMUST00000214125 459 ntBASIC14.86□□□□□ -0.03
Scn1aA2APX8 Gm17795-201ENSMUST00000214505 757 ntBASIC14.86□□□□□ -0.03
Scn1aA2APX8 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Scn1aA2APX8 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Scn1aA2APX8 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC14.86□□□□□ -0.03
Scn1aA2APX8 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Scn1aA2APX8 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Scn1aA2APX8 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Scn1aA2APX8 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Scn1aA2APX8 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Scn1aA2APX8 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Scn1aA2APX8 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Scn1aA2APX8 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Scn1aA2APX8 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Scn1aA2APX8 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.86□□□□□ -0.03
Scn1aA2APX8 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scn1aA2APX8 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scn1aA2APX8 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scn1aA2APX8 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC14.85□□□□□ -0.03
Scn1aA2APX8 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC14.85□□□□□ -0.03
Scn1aA2APX8 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Scn1aA2APX8 Gm21470-201ENSMUST00000187680 696 ntBASIC14.85□□□□□ -0.03
Scn1aA2APX8 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC14.85□□□□□ -0.03
Scn1aA2APX8 AC159006.1-201ENSMUST00000226396 258 ntBASIC14.85□□□□□ -0.03
Scn1aA2APX8 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scn1aA2APX8 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scn1aA2APX8 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC14.85□□□□□ -0.03
Scn1aA2APX8 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scn1aA2APX8 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scn1aA2APX8 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Scn1aA2APX8 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Scn1aA2APX8 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC14.85□□□□□ -0.03
Scn1aA2APX8 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Scn1aA2APX8 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Scn1aA2APX8 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Scn1aA2APX8 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scn1aA2APX8 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Scn1aA2APX8 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Scn1aA2APX8 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Scn1aA2APX8 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Scn1aA2APX8 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Scn1aA2APX8 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Scn1aA2APX8 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.84□□□□□ -0.03
Scn1aA2APX8 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Scn1aA2APX8 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Scn1aA2APX8 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC14.84□□□□□ -0.03
Scn1aA2APX8 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC14.84□□□□□ -0.03
Scn1aA2APX8 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
Scn1aA2APX8 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Scn1aA2APX8 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Scn1aA2APX8 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Scn1aA2APX8 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Scn1aA2APX8 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Scn1aA2APX8 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Scn1aA2APX8 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Scn1aA2APX8 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Scn1aA2APX8 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Scn1aA2APX8 Gm4804-201ENSMUST00000182234 999 ntBASIC14.83□□□□□ -0.03
Scn1aA2APX8 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
Scn1aA2APX8 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Scn1aA2APX8 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Scn1aA2APX8 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Scn1aA2APX8 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Scn1aA2APX8 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Scn1aA2APX8 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Scn1aA2APX8 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Scn1aA2APX8 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Scn1aA2APX8 AC154527.2-201ENSMUST00000225256 1466 ntBASIC14.83□□□□□ -0.04
Scn1aA2APX8 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms