Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc112A0AUP1 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc112A0AUP1 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc112A0AUP1 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Ccdc112A0AUP1 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ccdc112A0AUP1 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ccdc112A0AUP1 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Ccdc112A0AUP1 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Ccdc112A0AUP1 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC16.27■□□□□ 0.19
Ccdc112A0AUP1 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Ccdc112A0AUP1 AC121801.1-201ENSMUST00000225363 1899 ntBASIC16.27■□□□□ 0.19
Ccdc112A0AUP1 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ccdc112A0AUP1 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Ccdc112A0AUP1 AC131586.3-201ENSMUST00000228355 1367 ntBASIC16.26■□□□□ 0.19
Ccdc112A0AUP1 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Ccdc112A0AUP1 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Ccdc112A0AUP1 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC16.26■□□□□ 0.19
Ccdc112A0AUP1 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc112A0AUP1 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
Ccdc112A0AUP1 Gm42872-201ENSMUST00000200026 1967 ntBASIC16.26■□□□□ 0.19
Ccdc112A0AUP1 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc112A0AUP1 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Ccdc112A0AUP1 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc112A0AUP1 Gm5763-201ENSMUST00000155951 1530 ntBASIC16.26■□□□□ 0.19
Ccdc112A0AUP1 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc112A0AUP1 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC16.26■□□□□ 0.19
Ccdc112A0AUP1 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc112A0AUP1 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC16.26■□□□□ 0.19
Ccdc112A0AUP1 Gm15427-201ENSMUST00000117288 531 ntBASIC16.26■□□□□ 0.19
Ccdc112A0AUP1 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC16.26■□□□□ 0.19
Ccdc112A0AUP1 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Ccdc112A0AUP1 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc112A0AUP1 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC16.26■□□□□ 0.19
Ccdc112A0AUP1 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc112A0AUP1 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc112A0AUP1 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc112A0AUP1 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc112A0AUP1 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc112A0AUP1 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc112A0AUP1 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
Ccdc112A0AUP1 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc112A0AUP1 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Ccdc112A0AUP1 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc112A0AUP1 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Ccdc112A0AUP1 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc112A0AUP1 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc112A0AUP1 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc112A0AUP1 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc112A0AUP1 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc112A0AUP1 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc112A0AUP1 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc112A0AUP1 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC16.25■□□□□ 0.19
Ccdc112A0AUP1 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Ccdc112A0AUP1 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc112A0AUP1 Gm6973-201ENSMUST00000117080 721 ntBASIC16.25■□□□□ 0.19
Ccdc112A0AUP1 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC16.25■□□□□ 0.19
Ccdc112A0AUP1 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC16.25■□□□□ 0.19
Ccdc112A0AUP1 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC16.25■□□□□ 0.19
Ccdc112A0AUP1 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC16.25■□□□□ 0.19
Ccdc112A0AUP1 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC16.25■□□□□ 0.19
Ccdc112A0AUP1 AC131187.1-201ENSMUST00000224567 809 ntBASIC16.25■□□□□ 0.19
Ccdc112A0AUP1 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc112A0AUP1 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc112A0AUP1 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC16.25■□□□□ 0.19
Ccdc112A0AUP1 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc112A0AUP1 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc112A0AUP1 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc112A0AUP1 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc112A0AUP1 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC16.25■□□□□ 0.19
Ccdc112A0AUP1 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc112A0AUP1 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc112A0AUP1 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc112A0AUP1 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc112A0AUP1 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC16.24■□□□□ 0.19
Ccdc112A0AUP1 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Ccdc112A0AUP1 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Ccdc112A0AUP1 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc112A0AUP1 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC16.24■□□□□ 0.19
Ccdc112A0AUP1 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc112A0AUP1 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc112A0AUP1 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc112A0AUP1 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc112A0AUP1 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc112A0AUP1 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc112A0AUP1 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc112A0AUP1 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc112A0AUP1 Gm6756-201ENSMUST00000180647 1620 ntBASIC16.24■□□□□ 0.19
Ccdc112A0AUP1 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Ccdc112A0AUP1 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc112A0AUP1 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc112A0AUP1 Gm6226-201ENSMUST00000117765 1146 ntBASIC16.24■□□□□ 0.19
Ccdc112A0AUP1 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc112A0AUP1 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc112A0AUP1 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC16.24■□□□□ 0.19
Ccdc112A0AUP1 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc112A0AUP1 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc112A0AUP1 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC16.24■□□□□ 0.19
Ccdc112A0AUP1 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc112A0AUP1 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc112A0AUP1 Gm9109-201ENSMUST00000120254 1405 ntBASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms