Protein–RNA interactions for Protein: A0A1B0GSK3

Lnp1, Leukemia NUP98 fusion partner 1, mousemouse

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lnp1A0A1B0GSK3 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lnp1A0A1B0GSK3 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Lnp1A0A1B0GSK3 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Lnp1A0A1B0GSK3 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Lnp1A0A1B0GSK3 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lnp1A0A1B0GSK3 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Lnp1A0A1B0GSK3 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lnp1A0A1B0GSK3 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lnp1A0A1B0GSK3 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lnp1A0A1B0GSK3 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lnp1A0A1B0GSK3 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lnp1A0A1B0GSK3 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lnp1A0A1B0GSK3 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Lnp1A0A1B0GSK3 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lnp1A0A1B0GSK3 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lnp1A0A1B0GSK3 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lnp1A0A1B0GSK3 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lnp1A0A1B0GSK3 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lnp1A0A1B0GSK3 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC11.87□□□□□ -0.51
Lnp1A0A1B0GSK3 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Lnp1A0A1B0GSK3 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC11.87□□□□□ -0.51
Lnp1A0A1B0GSK3 Gm44335-201ENSMUST00000196879 141 ntBASIC11.87□□□□□ -0.51
Lnp1A0A1B0GSK3 Gm2213-201ENSMUST00000197485 688 ntBASIC11.87□□□□□ -0.51
Lnp1A0A1B0GSK3 Gm44297-201ENSMUST00000198304 141 ntBASIC11.87□□□□□ -0.51
Lnp1A0A1B0GSK3 Gm44346-201ENSMUST00000198851 141 ntBASIC11.87□□□□□ -0.51
Lnp1A0A1B0GSK3 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC11.87□□□□□ -0.51
Lnp1A0A1B0GSK3 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Lnp1A0A1B0GSK3 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lnp1A0A1B0GSK3 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lnp1A0A1B0GSK3 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lnp1A0A1B0GSK3 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lnp1A0A1B0GSK3 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lnp1A0A1B0GSK3 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Lnp1A0A1B0GSK3 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lnp1A0A1B0GSK3 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Lnp1A0A1B0GSK3 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Lnp1A0A1B0GSK3 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Lnp1A0A1B0GSK3 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lnp1A0A1B0GSK3 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Lnp1A0A1B0GSK3 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lnp1A0A1B0GSK3 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Lnp1A0A1B0GSK3 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lnp1A0A1B0GSK3 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lnp1A0A1B0GSK3 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lnp1A0A1B0GSK3 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
Lnp1A0A1B0GSK3 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC11.86□□□□□ -0.51
Lnp1A0A1B0GSK3 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Lnp1A0A1B0GSK3 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC11.86□□□□□ -0.51
Lnp1A0A1B0GSK3 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lnp1A0A1B0GSK3 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lnp1A0A1B0GSK3 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lnp1A0A1B0GSK3 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lnp1A0A1B0GSK3 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC11.86□□□□□ -0.51
Lnp1A0A1B0GSK3 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Lnp1A0A1B0GSK3 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lnp1A0A1B0GSK3 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lnp1A0A1B0GSK3 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lnp1A0A1B0GSK3 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lnp1A0A1B0GSK3 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lnp1A0A1B0GSK3 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Lnp1A0A1B0GSK3 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lnp1A0A1B0GSK3 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC11.86□□□□□ -0.51
Lnp1A0A1B0GSK3 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Lnp1A0A1B0GSK3 Gm38225-201ENSMUST00000194001 393 ntBASIC11.86□□□□□ -0.51
Lnp1A0A1B0GSK3 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lnp1A0A1B0GSK3 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lnp1A0A1B0GSK3 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Lnp1A0A1B0GSK3 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Lnp1A0A1B0GSK3 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Lnp1A0A1B0GSK3 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lnp1A0A1B0GSK3 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Lnp1A0A1B0GSK3 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Lnp1A0A1B0GSK3 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC11.86□□□□□ -0.51
Lnp1A0A1B0GSK3 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC11.86□□□□□ -0.51
Lnp1A0A1B0GSK3 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Lnp1A0A1B0GSK3 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lnp1A0A1B0GSK3 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lnp1A0A1B0GSK3 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lnp1A0A1B0GSK3 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC11.86□□□□□ -0.51
Lnp1A0A1B0GSK3 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lnp1A0A1B0GSK3 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lnp1A0A1B0GSK3 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lnp1A0A1B0GSK3 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Lnp1A0A1B0GSK3 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lnp1A0A1B0GSK3 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lnp1A0A1B0GSK3 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lnp1A0A1B0GSK3 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lnp1A0A1B0GSK3 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lnp1A0A1B0GSK3 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lnp1A0A1B0GSK3 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Lnp1A0A1B0GSK3 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Lnp1A0A1B0GSK3 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC11.85□□□□□ -0.51
Lnp1A0A1B0GSK3 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC11.85□□□□□ -0.51
Lnp1A0A1B0GSK3 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC11.85□□□□□ -0.51
Lnp1A0A1B0GSK3 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC11.85□□□□□ -0.51
Lnp1A0A1B0GSK3 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
Lnp1A0A1B0GSK3 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC11.85□□□□□ -0.51
Lnp1A0A1B0GSK3 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Lnp1A0A1B0GSK3 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lnp1A0A1B0GSK3 Mir6990-201ENSMUST00000183724 91 ntBASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 76.3 ms