Protein–RNA interactions for Protein: A0A0G2JFS9

Atg4a-ps, Cysteine protease, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4a-psA0A0G2JFS9 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC17.3■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC17.3■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Gm13223-201ENSMUST00000118609 747 ntBASIC17.3■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Atg4a-psA0A0G2JFS9 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Ighv8-14-201ENSMUST00000196781 358 ntBASIC17.3■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Gm6916-202ENSMUST00000205523 195 ntBASIC17.3■□□□□ 0.36
Atg4a-psA0A0G2JFS9 AC124732.2-201ENSMUST00000221977 316 ntBASIC17.3■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Atg4a-psA0A0G2JFS9 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC17.3■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC17.29■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Gm25144-201ENSMUST00000179561 110 ntBASIC17.29■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Gm25352-201ENSMUST00000179815 110 ntBASIC17.29■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC17.29■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Atg4a-psA0A0G2JFS9 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC17.28■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Atg4a-psA0A0G2JFS9 AA543401-201ENSMUST00000164248 1269 ntBASIC17.28■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC17.28■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC17.28■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC17.28■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms