Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Gm37230-201ENSMUST00000194491 818 ntBASIC10.39□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC10.39□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC10.39□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Trav9n-2A0A0G2JDP3 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC10.39□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC10.39□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC10.38□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC10.38□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav9n-2A0A0G2JDP3 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC10.38□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav9n-2A0A0G2JDP3 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC10.38□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC10.38□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Gm6756-201ENSMUST00000180647 1620 ntBASIC10.38□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC10.38□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC10.38□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC10.38□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC10.38□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC10.38□□□□□ -0.75
Trav9n-2A0A0G2JDP3 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC10.38□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC10.38□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Nrn1-204ENSMUST00000224323 1779 ntBASIC10.38□□□□□ -0.75
Trav9n-2A0A0G2JDP3 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC10.38□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav9n-2A0A0G2JDP3 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC10.37□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC10.37□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC10.37□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Gm11745-201ENSMUST00000121669 448 ntBASIC10.37□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC10.37□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trav9n-2A0A0G2JDP3 AC155252.2-201ENSMUST00000226946 680 ntBASIC10.37□□□□□ -0.75
Trav9n-2A0A0G2JDP3 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC10.37□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms