Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6d-5A0A075B6B9 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6d-5A0A075B6B9 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6d-5A0A075B6B9 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6d-5A0A075B6B9 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC11.51□□□□□ -0.57
Trav6d-5A0A075B6B9 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6d-5A0A075B6B9 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6d-5A0A075B6B9 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Trav6d-5A0A075B6B9 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6d-5A0A075B6B9 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6d-5A0A075B6B9 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6d-5A0A075B6B9 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC11.51□□□□□ -0.57
Trav6d-5A0A075B6B9 Acot6-202ENSMUST00000222921 3622 ntBASIC11.51□□□□□ -0.57
Trav6d-5A0A075B6B9 Gm45779-201ENSMUST00000212189 4064 ntBASIC11.51□□□□□ -0.57
Trav6d-5A0A075B6B9 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Trav6d-5A0A075B6B9 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6d-5A0A075B6B9 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6d-5A0A075B6B9 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC11.51□□□□□ -0.57
Trav6d-5A0A075B6B9 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6d-5A0A075B6B9 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6d-5A0A075B6B9 Gm25990-201ENSMUST00000102440 86 ntBASIC11.51□□□□□ -0.57
Trav6d-5A0A075B6B9 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6d-5A0A075B6B9 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6d-5A0A075B6B9 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Trav6d-5A0A075B6B9 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC11.51□□□□□ -0.57
Trav6d-5A0A075B6B9 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6d-5A0A075B6B9 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC11.51□□□□□ -0.57
Trav6d-5A0A075B6B9 Gm10275-202ENSMUST00000168697 495 ntBASIC11.51□□□□□ -0.57
Trav6d-5A0A075B6B9 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Trav6d-5A0A075B6B9 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6d-5A0A075B6B9 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC11.51□□□□□ -0.57
Trav6d-5A0A075B6B9 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6d-5A0A075B6B9 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6d-5A0A075B6B9 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6d-5A0A075B6B9 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6d-5A0A075B6B9 Gm10275-201ENSMUST00000092620 635 ntBASIC11.51□□□□□ -0.57
Trav6d-5A0A075B6B9 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6d-5A0A075B6B9 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6d-5A0A075B6B9 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Trav6d-5A0A075B6B9 Gm13294-201ENSMUST00000121757 1330 ntBASIC11.51□□□□□ -0.57
Trav6d-5A0A075B6B9 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6d-5A0A075B6B9 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6d-5A0A075B6B9 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6d-5A0A075B6B9 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6d-5A0A075B6B9 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6d-5A0A075B6B9 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6d-5A0A075B6B9 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Trav6d-5A0A075B6B9 Gm37644-201ENSMUST00000192190 2270 ntBASIC11.51□□□□□ -0.57
Trav6d-5A0A075B6B9 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Trav6d-5A0A075B6B9 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6d-5A0A075B6B9 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6d-5A0A075B6B9 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6d-5A0A075B6B9 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6d-5A0A075B6B9 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6d-5A0A075B6B9 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6d-5A0A075B6B9 Gm12020-201ENSMUST00000119030 2042 ntBASIC11.5□□□□□ -0.57
Trav6d-5A0A075B6B9 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6d-5A0A075B6B9 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6d-5A0A075B6B9 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6d-5A0A075B6B9 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Trav6d-5A0A075B6B9 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC11.5□□□□□ -0.57
Trav6d-5A0A075B6B9 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6d-5A0A075B6B9 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Trav6d-5A0A075B6B9 Gm43570-201ENSMUST00000199951 3688 ntBASIC11.5□□□□□ -0.57
Trav6d-5A0A075B6B9 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6d-5A0A075B6B9 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6d-5A0A075B6B9 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6d-5A0A075B6B9 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6d-5A0A075B6B9 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6d-5A0A075B6B9 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6d-5A0A075B6B9 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Trav6d-5A0A075B6B9 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC11.5□□□□□ -0.57
Trav6d-5A0A075B6B9 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6d-5A0A075B6B9 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC11.5□□□□□ -0.57
Trav6d-5A0A075B6B9 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC11.5□□□□□ -0.57
Trav6d-5A0A075B6B9 Gm45098-201ENSMUST00000207179 657 ntBASIC11.5□□□□□ -0.57
Trav6d-5A0A075B6B9 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC11.5□□□□□ -0.57
Trav6d-5A0A075B6B9 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6d-5A0A075B6B9 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6d-5A0A075B6B9 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6d-5A0A075B6B9 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6d-5A0A075B6B9 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6d-5A0A075B6B9 Grk6-205ENSMUST00000224653 2976 ntBASIC11.5□□□□□ -0.57
Trav6d-5A0A075B6B9 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6d-5A0A075B6B9 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6d-5A0A075B6B9 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6d-5A0A075B6B9 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6d-5A0A075B6B9 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6d-5A0A075B6B9 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6d-5A0A075B6B9 Gm42928-201ENSMUST00000197338 3339 ntBASIC11.5□□□□□ -0.57
Trav6d-5A0A075B6B9 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Trav6d-5A0A075B6B9 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6d-5A0A075B6B9 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6d-5A0A075B6B9 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6d-5A0A075B6B9 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6d-5A0A075B6B9 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6d-5A0A075B6B9 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6d-5A0A075B6B9 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6d-5A0A075B6B9 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Trav6d-5A0A075B6B9 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms