Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trav6n-6A0A075B6B2 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trav6n-6A0A075B6B2 Gm11453-201ENSMUST00000117318 1007 ntBASIC10.66□□□□□ -0.7
Trav6n-6A0A075B6B2 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav6n-6A0A075B6B2 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC10.66□□□□□ -0.7
Trav6n-6A0A075B6B2 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trav6n-6A0A075B6B2 Mir5126-201ENSMUST00000175513 77 ntBASIC10.66□□□□□ -0.7
Trav6n-6A0A075B6B2 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav6n-6A0A075B6B2 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC10.66□□□□□ -0.7
Trav6n-6A0A075B6B2 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC10.66□□□□□ -0.7
Trav6n-6A0A075B6B2 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC10.66□□□□□ -0.7
Trav6n-6A0A075B6B2 AC133598.3-202ENSMUST00000224219 531 ntBASIC10.66□□□□□ -0.7
Trav6n-6A0A075B6B2 AC159106.1-201ENSMUST00000224421 690 ntBASIC10.66□□□□□ -0.7
Trav6n-6A0A075B6B2 AC159093.1-201ENSMUST00000227779 380 ntBASIC10.66□□□□□ -0.7
Trav6n-6A0A075B6B2 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav6n-6A0A075B6B2 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav6n-6A0A075B6B2 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Trav6n-6A0A075B6B2 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav6n-6A0A075B6B2 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav6n-6A0A075B6B2 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Trav6n-6A0A075B6B2 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav6n-6A0A075B6B2 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Trav6n-6A0A075B6B2 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav6n-6A0A075B6B2 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav6n-6A0A075B6B2 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav6n-6A0A075B6B2 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav6n-6A0A075B6B2 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav6n-6A0A075B6B2 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC10.66□□□□□ -0.7
Trav6n-6A0A075B6B2 Gm44241-201ENSMUST00000203230 1662 ntBASIC10.66□□□□□ -0.7
Trav6n-6A0A075B6B2 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trav6n-6A0A075B6B2 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav6n-6A0A075B6B2 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC10.66□□□□□ -0.7
Trav6n-6A0A075B6B2 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav6n-6A0A075B6B2 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC10.66□□□□□ -0.7
Trav6n-6A0A075B6B2 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav6n-6A0A075B6B2 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav6n-6A0A075B6B2 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav6n-6A0A075B6B2 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Trav6n-6A0A075B6B2 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav6n-6A0A075B6B2 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav6n-6A0A075B6B2 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav6n-6A0A075B6B2 Pcgf5-211ENSMUST00000225920 6443 ntBASIC10.65□□□□□ -0.7
Trav6n-6A0A075B6B2 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Trav6n-6A0A075B6B2 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav6n-6A0A075B6B2 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav6n-6A0A075B6B2 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav6n-6A0A075B6B2 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav6n-6A0A075B6B2 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav6n-6A0A075B6B2 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Trav6n-6A0A075B6B2 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav6n-6A0A075B6B2 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC10.65□□□□□ -0.7
Trav6n-6A0A075B6B2 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC10.65□□□□□ -0.7
Trav6n-6A0A075B6B2 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC10.65□□□□□ -0.7
Trav6n-6A0A075B6B2 Gm5253-201ENSMUST00000187104 1025 ntBASIC10.65□□□□□ -0.7
Trav6n-6A0A075B6B2 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav6n-6A0A075B6B2 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC10.65□□□□□ -0.7
Trav6n-6A0A075B6B2 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav6n-6A0A075B6B2 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav6n-6A0A075B6B2 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC10.65□□□□□ -0.7
Trav6n-6A0A075B6B2 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Trav6n-6A0A075B6B2 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Trav6n-6A0A075B6B2 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav6n-6A0A075B6B2 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Trav6n-6A0A075B6B2 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Trav6n-6A0A075B6B2 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav6n-6A0A075B6B2 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav6n-6A0A075B6B2 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Trav6n-6A0A075B6B2 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Trav6n-6A0A075B6B2 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Trav6n-6A0A075B6B2 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav6n-6A0A075B6B2 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Trav6n-6A0A075B6B2 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav6n-6A0A075B6B2 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.71
Trav6n-6A0A075B6B2 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.71
Trav6n-6A0A075B6B2 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Trav6n-6A0A075B6B2 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.71
Trav6n-6A0A075B6B2 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.71
Trav6n-6A0A075B6B2 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.71
Trav6n-6A0A075B6B2 Mbnl2-204ENSMUST00000227012 2390 ntBASIC10.65□□□□□ -0.71
Trav6n-6A0A075B6B2 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.71
Trav6n-6A0A075B6B2 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Trav6n-6A0A075B6B2 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Trav6n-6A0A075B6B2 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav6n-6A0A075B6B2 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav6n-6A0A075B6B2 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav6n-6A0A075B6B2 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav6n-6A0A075B6B2 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Trav6n-6A0A075B6B2 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav6n-6A0A075B6B2 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC10.64□□□□□ -0.71
Trav6n-6A0A075B6B2 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav6n-6A0A075B6B2 Ntrk2-204ENSMUST00000224259 3049 ntBASIC10.64□□□□□ -0.71
Trav6n-6A0A075B6B2 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Trav6n-6A0A075B6B2 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav6n-6A0A075B6B2 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav6n-6A0A075B6B2 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Trav6n-6A0A075B6B2 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav6n-6A0A075B6B2 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav6n-6A0A075B6B2 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Trav6n-6A0A075B6B2 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav6n-6A0A075B6B2 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 94.5 ms