Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav18A0A075B656 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav18A0A075B656 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav18A0A075B656 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav18A0A075B656 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
Trav18A0A075B656 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav18A0A075B656 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav18A0A075B656 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC11.69□□□□□ -0.54
Trav18A0A075B656 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC11.69□□□□□ -0.54
Trav18A0A075B656 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC11.69□□□□□ -0.54
Trav18A0A075B656 Gm8584-201ENSMUST00000171982 758 ntBASIC11.69□□□□□ -0.54
Trav18A0A075B656 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav18A0A075B656 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav18A0A075B656 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC11.69□□□□□ -0.54
Trav18A0A075B656 CT025555.1-201ENSMUST00000225901 1217 ntBASIC11.69□□□□□ -0.54
Trav18A0A075B656 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav18A0A075B656 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav18A0A075B656 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav18A0A075B656 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav18A0A075B656 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav18A0A075B656 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav18A0A075B656 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav18A0A075B656 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav18A0A075B656 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Trav18A0A075B656 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav18A0A075B656 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Trav18A0A075B656 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC11.69□□□□□ -0.54
Trav18A0A075B656 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav18A0A075B656 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC11.68□□□□□ -0.54
Trav18A0A075B656 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav18A0A075B656 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav18A0A075B656 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav18A0A075B656 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC11.68□□□□□ -0.54
Trav18A0A075B656 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Trav18A0A075B656 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav18A0A075B656 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav18A0A075B656 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav18A0A075B656 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Trav18A0A075B656 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav18A0A075B656 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Trav18A0A075B656 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Trav18A0A075B656 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Trav18A0A075B656 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav18A0A075B656 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav18A0A075B656 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC11.68□□□□□ -0.54
Trav18A0A075B656 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav18A0A075B656 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav18A0A075B656 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Trav18A0A075B656 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC11.68□□□□□ -0.54
Trav18A0A075B656 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC11.68□□□□□ -0.54
Trav18A0A075B656 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC11.68□□□□□ -0.54
Trav18A0A075B656 Mzt1-203ENSMUST00000227948 952 ntBASIC11.68□□□□□ -0.54
Trav18A0A075B656 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav18A0A075B656 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav18A0A075B656 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav18A0A075B656 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav18A0A075B656 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav18A0A075B656 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC11.68□□□□□ -0.54
Trav18A0A075B656 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav18A0A075B656 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav18A0A075B656 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav18A0A075B656 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav18A0A075B656 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav18A0A075B656 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Trav18A0A075B656 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Trav18A0A075B656 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav18A0A075B656 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav18A0A075B656 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav18A0A075B656 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav18A0A075B656 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav18A0A075B656 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav18A0A075B656 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav18A0A075B656 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav18A0A075B656 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Trav18A0A075B656 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
Trav18A0A075B656 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC11.67□□□□□ -0.54
Trav18A0A075B656 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav18A0A075B656 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav18A0A075B656 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav18A0A075B656 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav18A0A075B656 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC11.67□□□□□ -0.54
Trav18A0A075B656 Gm18733-201ENSMUST00000173950 856 ntBASIC11.67□□□□□ -0.54
Trav18A0A075B656 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Trav18A0A075B656 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC11.67□□□□□ -0.54
Trav18A0A075B656 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav18A0A075B656 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav18A0A075B656 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav18A0A075B656 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav18A0A075B656 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC11.67□□□□□ -0.54
Trav18A0A075B656 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav18A0A075B656 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav18A0A075B656 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav18A0A075B656 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav18A0A075B656 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
Trav18A0A075B656 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Trav18A0A075B656 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC11.67□□□□□ -0.54
Trav18A0A075B656 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav18A0A075B656 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav18A0A075B656 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav18A0A075B656 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms