Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Msh4Q99MT2 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Msh4Q99MT2 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Msh4Q99MT2 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Msh4Q99MT2 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC21.27■■□□□ 1
Msh4Q99MT2 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC21.27■■□□□ 1
Msh4Q99MT2 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Msh4Q99MT2 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Msh4Q99MT2 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Msh4Q99MT2 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Msh4Q99MT2 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Msh4Q99MT2 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Msh4Q99MT2 Gm7332-201ENSMUST00000118351 454 ntBASIC21.26■□□□□ 0.99
Msh4Q99MT2 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
Msh4Q99MT2 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Msh4Q99MT2 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Msh4Q99MT2 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Msh4Q99MT2 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Msh4Q99MT2 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Msh4Q99MT2 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Msh4Q99MT2 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Msh4Q99MT2 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Msh4Q99MT2 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Msh4Q99MT2 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Msh4Q99MT2 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Msh4Q99MT2 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Msh4Q99MT2 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Msh4Q99MT2 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.23■□□□□ 0.99
Msh4Q99MT2 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Msh4Q99MT2 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Msh4Q99MT2 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Msh4Q99MT2 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Msh4Q99MT2 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
Msh4Q99MT2 Gm44428-201ENSMUST00000204474 874 ntBASIC21.22■□□□□ 0.99
Msh4Q99MT2 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Msh4Q99MT2 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Msh4Q99MT2 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Msh4Q99MT2 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Msh4Q99MT2 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.99
Msh4Q99MT2 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Msh4Q99MT2 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Msh4Q99MT2 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Msh4Q99MT2 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Msh4Q99MT2 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Msh4Q99MT2 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC21.19■□□□□ 0.98
Msh4Q99MT2 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Msh4Q99MT2 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Msh4Q99MT2 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Msh4Q99MT2 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Msh4Q99MT2 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Msh4Q99MT2 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Msh4Q99MT2 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Msh4Q99MT2 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Msh4Q99MT2 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Msh4Q99MT2 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC21.18■□□□□ 0.98
Msh4Q99MT2 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC21.18■□□□□ 0.98
Msh4Q99MT2 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Msh4Q99MT2 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Msh4Q99MT2 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21.17■□□□□ 0.98
Msh4Q99MT2 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Msh4Q99MT2 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.17■□□□□ 0.98
Msh4Q99MT2 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Msh4Q99MT2 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Msh4Q99MT2 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Msh4Q99MT2 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Msh4Q99MT2 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Msh4Q99MT2 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Msh4Q99MT2 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Msh4Q99MT2 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Msh4Q99MT2 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC21.15■□□□□ 0.98
Msh4Q99MT2 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC21.15■□□□□ 0.98
Msh4Q99MT2 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Msh4Q99MT2 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Msh4Q99MT2 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC21.14■□□□□ 0.98
Msh4Q99MT2 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC21.14■□□□□ 0.97
Msh4Q99MT2 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Msh4Q99MT2 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Msh4Q99MT2 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Msh4Q99MT2 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Msh4Q99MT2 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
Msh4Q99MT2 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Msh4Q99MT2 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Msh4Q99MT2 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Msh4Q99MT2 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Msh4Q99MT2 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Msh4Q99MT2 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Msh4Q99MT2 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Msh4Q99MT2 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC21.11■□□□□ 0.97
Msh4Q99MT2 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.11■□□□□ 0.97
Msh4Q99MT2 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Msh4Q99MT2 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Msh4Q99MT2 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Msh4Q99MT2 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Msh4Q99MT2 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Msh4Q99MT2 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Msh4Q99MT2 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Msh4Q99MT2 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC21.1■□□□□ 0.97
Msh4Q99MT2 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Msh4Q99MT2 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Msh4Q99MT2 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 101.7 ms