Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC21.99■■□□□ 1.11
Cstf1Q99LC2 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Cstf1Q99LC2 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
Cstf1Q99LC2 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Cstf1Q99LC2 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Cstf1Q99LC2 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Cstf1Q99LC2 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Cstf1Q99LC2 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Cstf1Q99LC2 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Cstf1Q99LC2 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC21.98■■□□□ 1.11
Cstf1Q99LC2 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC21.98■■□□□ 1.11
Cstf1Q99LC2 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC21.98■■□□□ 1.11
Cstf1Q99LC2 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Cstf1Q99LC2 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Cstf1Q99LC2 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Cstf1Q99LC2 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC21.97■■□□□ 1.11
Cstf1Q99LC2 Gm16464-201ENSMUST00000117815 1095 ntBASIC21.97■■□□□ 1.11
Cstf1Q99LC2 Gm5297-201ENSMUST00000198555 1171 ntBASIC21.97■■□□□ 1.11
Cstf1Q99LC2 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
Cstf1Q99LC2 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Cstf1Q99LC2 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Cstf1Q99LC2 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
Cstf1Q99LC2 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Cstf1Q99LC2 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Cstf1Q99LC2 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC21.96■■□□□ 1.11
Cstf1Q99LC2 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Cstf1Q99LC2 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Cstf1Q99LC2 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Cstf1Q99LC2 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Cstf1Q99LC2 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.95■■□□□ 1.1
Cstf1Q99LC2 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Cstf1Q99LC2 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Cstf1Q99LC2 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Cstf1Q99LC2 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Cstf1Q99LC2 Gm21956-201ENSMUST00000179946 522 ntBASIC21.94■■□□□ 1.1
Cstf1Q99LC2 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC21.94■■□□□ 1.1
Cstf1Q99LC2 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC21.94■■□□□ 1.1
Cstf1Q99LC2 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
Cstf1Q99LC2 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Cstf1Q99LC2 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Cstf1Q99LC2 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Cstf1Q99LC2 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Cstf1Q99LC2 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Cstf1Q99LC2 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Cstf1Q99LC2 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Cstf1Q99LC2 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Cstf1Q99LC2 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.92■■□□□ 1.1
Cstf1Q99LC2 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Cstf1Q99LC2 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Cstf1Q99LC2 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Cstf1Q99LC2 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Cstf1Q99LC2 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC21.91■■□□□ 1.1
Cstf1Q99LC2 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Cstf1Q99LC2 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Cstf1Q99LC2 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC21.91■■□□□ 1.1
Cstf1Q99LC2 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
Cstf1Q99LC2 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Cstf1Q99LC2 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Cstf1Q99LC2 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Cstf1Q99LC2 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Cstf1Q99LC2 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Cstf1Q99LC2 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Cstf1Q99LC2 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC21.89■■□□□ 1.09
Cstf1Q99LC2 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC21.89■■□□□ 1.09
Cstf1Q99LC2 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
Cstf1Q99LC2 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
Cstf1Q99LC2 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Cstf1Q99LC2 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
Cstf1Q99LC2 Gm22238-201ENSMUST00000175222 88 ntBASIC21.88■■□□□ 1.09
Cstf1Q99LC2 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC21.88■■□□□ 1.09
Cstf1Q99LC2 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Cstf1Q99LC2 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Cstf1Q99LC2 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC21.87■■□□□ 1.09
Cstf1Q99LC2 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Cstf1Q99LC2 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Cstf1Q99LC2 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
Cstf1Q99LC2 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC21.86■■□□□ 1.09
Cstf1Q99LC2 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Cstf1Q99LC2 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Cstf1Q99LC2 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Cstf1Q99LC2 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Cstf1Q99LC2 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Cstf1Q99LC2 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Cstf1Q99LC2 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC21.85■■□□□ 1.09
Cstf1Q99LC2 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Cstf1Q99LC2 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Cstf1Q99LC2 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Cstf1Q99LC2 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Cstf1Q99LC2 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Cstf1Q99LC2 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.84■■□□□ 1.09
Cstf1Q99LC2 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Cstf1Q99LC2 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Cstf1Q99LC2 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC21.84■■□□□ 1.09
Cstf1Q99LC2 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Cstf1Q99LC2 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Cstf1Q99LC2 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
Cstf1Q99LC2 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Cstf1Q99LC2 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC21.83■■□□□ 1.09
Cstf1Q99LC2 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Cstf1Q99LC2 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.83■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 465.7 ms