Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Pcdhb5Q91XZ5 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Pcdhb5Q91XZ5 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC26.16■■□□□ 1.78
Pcdhb5Q91XZ5 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Pcdhb5Q91XZ5 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Pcdhb5Q91XZ5 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC26.14■■□□□ 1.78
Pcdhb5Q91XZ5 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Pcdhb5Q91XZ5 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Pcdhb5Q91XZ5 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Pcdhb5Q91XZ5 Gm15039-201ENSMUST00000118914 875 ntBASIC26.13■■□□□ 1.77
Pcdhb5Q91XZ5 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC26.13■■□□□ 1.77
Pcdhb5Q91XZ5 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC26.13■■□□□ 1.77
Pcdhb5Q91XZ5 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Pcdhb5Q91XZ5 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC26.13■■□□□ 1.77
Pcdhb5Q91XZ5 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Pcdhb5Q91XZ5 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Pcdhb5Q91XZ5 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC26.13■■□□□ 1.77
Pcdhb5Q91XZ5 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC26.12■■□□□ 1.77
Pcdhb5Q91XZ5 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC26.12■■□□□ 1.77
Pcdhb5Q91XZ5 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC26.12■■□□□ 1.77
Pcdhb5Q91XZ5 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Pcdhb5Q91XZ5 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Pcdhb5Q91XZ5 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Pcdhb5Q91XZ5 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Pcdhb5Q91XZ5 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Pcdhb5Q91XZ5 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC26.12■■□□□ 1.77
Pcdhb5Q91XZ5 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC26.11■■□□□ 1.77
Pcdhb5Q91XZ5 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC26.11■■□□□ 1.77
Pcdhb5Q91XZ5 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC26.11■■□□□ 1.77
Pcdhb5Q91XZ5 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Pcdhb5Q91XZ5 AC153524.1-201ENSMUST00000220436 1935 ntBASIC26.11■■□□□ 1.77
Pcdhb5Q91XZ5 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Pcdhb5Q91XZ5 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
Pcdhb5Q91XZ5 Etf1-202ENSMUST00000180351 108 ntBASIC26.1■■□□□ 1.77
Pcdhb5Q91XZ5 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC26.1■■□□□ 1.77
Pcdhb5Q91XZ5 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
Pcdhb5Q91XZ5 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Pcdhb5Q91XZ5 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Pcdhb5Q91XZ5 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Pcdhb5Q91XZ5 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Pcdhb5Q91XZ5 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Pcdhb5Q91XZ5 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC26.09■■□□□ 1.77
Pcdhb5Q91XZ5 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Pcdhb5Q91XZ5 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC26.09■■□□□ 1.77
Pcdhb5Q91XZ5 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Pcdhb5Q91XZ5 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Pcdhb5Q91XZ5 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Pcdhb5Q91XZ5 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC26.06■■□□□ 1.76
Pcdhb5Q91XZ5 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Pcdhb5Q91XZ5 Gm16464-201ENSMUST00000117815 1095 ntBASIC26.06■■□□□ 1.76
Pcdhb5Q91XZ5 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Pcdhb5Q91XZ5 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC26.05■■□□□ 1.76
Pcdhb5Q91XZ5 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Pcdhb5Q91XZ5 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC26.05■■□□□ 1.76
Pcdhb5Q91XZ5 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC26.05■■□□□ 1.76
Pcdhb5Q91XZ5 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC26.05■■□□□ 1.76
Pcdhb5Q91XZ5 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC26.05■■□□□ 1.76
Pcdhb5Q91XZ5 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
Pcdhb5Q91XZ5 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC26.04■■□□□ 1.76
Pcdhb5Q91XZ5 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Pcdhb5Q91XZ5 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Pcdhb5Q91XZ5 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
Pcdhb5Q91XZ5 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Pcdhb5Q91XZ5 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Pcdhb5Q91XZ5 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC26.03■■□□□ 1.76
Pcdhb5Q91XZ5 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC26.03■■□□□ 1.76
Pcdhb5Q91XZ5 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC26.03■■□□□ 1.76
Pcdhb5Q91XZ5 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC26.03■■□□□ 1.76
Pcdhb5Q91XZ5 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Pcdhb5Q91XZ5 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Pcdhb5Q91XZ5 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Pcdhb5Q91XZ5 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC26.02■■□□□ 1.76
Pcdhb5Q91XZ5 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Pcdhb5Q91XZ5 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC26.02■■□□□ 1.76
Pcdhb5Q91XZ5 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC26.02■■□□□ 1.76
Pcdhb5Q91XZ5 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Pcdhb5Q91XZ5 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
Pcdhb5Q91XZ5 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Pcdhb5Q91XZ5 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC26.01■■□□□ 1.75
Pcdhb5Q91XZ5 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Pcdhb5Q91XZ5 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
Pcdhb5Q91XZ5 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC26.01■■□□□ 1.75
Pcdhb5Q91XZ5 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC26.01■■□□□ 1.75
Pcdhb5Q91XZ5 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC26.01■■□□□ 1.75
Pcdhb5Q91XZ5 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
Pcdhb5Q91XZ5 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Pcdhb5Q91XZ5 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
Pcdhb5Q91XZ5 Gm42699-201ENSMUST00000198104 1657 ntBASIC25.99■■□□□ 1.75
Pcdhb5Q91XZ5 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Pcdhb5Q91XZ5 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC25.99■■□□□ 1.75
Pcdhb5Q91XZ5 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
Pcdhb5Q91XZ5 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Pcdhb5Q91XZ5 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC25.98■■□□□ 1.75
Pcdhb5Q91XZ5 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Pcdhb5Q91XZ5 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC25.98■■□□□ 1.75
Pcdhb5Q91XZ5 Gm5131-201ENSMUST00000212776 1238 ntBASIC25.98■■□□□ 1.75
Pcdhb5Q91XZ5 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC25.98■■□□□ 1.75
Pcdhb5Q91XZ5 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC25.97■■□□□ 1.75
Pcdhb5Q91XZ5 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC25.97■■□□□ 1.75
Pcdhb5Q91XZ5 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms