Protein–RNA interactions for Protein: Q8VI88

Odf4, Outer dense fiber protein 4, mousemouse

Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Odf4Q8VI88 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Odf4Q8VI88 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Odf4Q8VI88 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Odf4Q8VI88 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.38■□□□□ 0.69
Odf4Q8VI88 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Odf4Q8VI88 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Odf4Q8VI88 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Odf4Q8VI88 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Odf4Q8VI88 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Odf4Q8VI88 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Odf4Q8VI88 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Odf4Q8VI88 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Odf4Q8VI88 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
Odf4Q8VI88 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
Odf4Q8VI88 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Odf4Q8VI88 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Odf4Q8VI88 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Odf4Q8VI88 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Odf4Q8VI88 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
Odf4Q8VI88 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Odf4Q8VI88 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Odf4Q8VI88 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Odf4Q8VI88 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Odf4Q8VI88 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.35■□□□□ 0.69
Odf4Q8VI88 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Odf4Q8VI88 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Odf4Q8VI88 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Odf4Q8VI88 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Odf4Q8VI88 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Odf4Q8VI88 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Odf4Q8VI88 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Odf4Q8VI88 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Odf4Q8VI88 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Odf4Q8VI88 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Odf4Q8VI88 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Odf4Q8VI88 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.34■□□□□ 0.69
Odf4Q8VI88 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Odf4Q8VI88 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Odf4Q8VI88 Gm14523-201ENSMUST00000117260 558 ntBASIC19.33■□□□□ 0.68
Odf4Q8VI88 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Odf4Q8VI88 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Odf4Q8VI88 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.33■□□□□ 0.68
Odf4Q8VI88 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Odf4Q8VI88 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Odf4Q8VI88 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Odf4Q8VI88 Notumos-201ENSMUST00000151998 2659 ntBASIC19.32■□□□□ 0.68
Odf4Q8VI88 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Odf4Q8VI88 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Odf4Q8VI88 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Odf4Q8VI88 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Odf4Q8VI88 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Odf4Q8VI88 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Odf4Q8VI88 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
Odf4Q8VI88 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Odf4Q8VI88 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Odf4Q8VI88 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC19.31■□□□□ 0.68
Odf4Q8VI88 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC19.31■□□□□ 0.68
Odf4Q8VI88 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Odf4Q8VI88 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Odf4Q8VI88 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Odf4Q8VI88 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Odf4Q8VI88 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Odf4Q8VI88 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Odf4Q8VI88 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Odf4Q8VI88 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Odf4Q8VI88 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC19.3■□□□□ 0.68
Odf4Q8VI88 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Odf4Q8VI88 Terc-201ENSMUST00000082862 423 ntBASIC19.3■□□□□ 0.68
Odf4Q8VI88 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Odf4Q8VI88 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Odf4Q8VI88 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Odf4Q8VI88 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Odf4Q8VI88 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Odf4Q8VI88 AC153911.1-201ENSMUST00000220378 758 ntBASIC19.29■□□□□ 0.68
Odf4Q8VI88 Gm14121-201ENSMUST00000121441 1380 ntBASIC19.29■□□□□ 0.68
Odf4Q8VI88 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Odf4Q8VI88 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Odf4Q8VI88 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Odf4Q8VI88 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Odf4Q8VI88 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Odf4Q8VI88 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Odf4Q8VI88 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Odf4Q8VI88 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.28■□□□□ 0.68
Odf4Q8VI88 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Odf4Q8VI88 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Odf4Q8VI88 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Odf4Q8VI88 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Odf4Q8VI88 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.27■□□□□ 0.67
Odf4Q8VI88 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Odf4Q8VI88 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Odf4Q8VI88 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Odf4Q8VI88 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Odf4Q8VI88 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.25■□□□□ 0.67
Odf4Q8VI88 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Odf4Q8VI88 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Odf4Q8VI88 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Odf4Q8VI88 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Odf4Q8VI88 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Odf4Q8VI88 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Odf4Q8VI88 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms