Protein–RNA interactions for Protein: Q8VE91

Retreg1d, Reticulophagy regulator 1, mousemouse

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg1dQ8VE91 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Retreg1dQ8VE91 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Retreg1dQ8VE91 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.55■■□□□ 1.04
Retreg1dQ8VE91 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.55■■□□□ 1.04
Retreg1dQ8VE91 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Retreg1dQ8VE91 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Retreg1dQ8VE91 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Retreg1dQ8VE91 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Retreg1dQ8VE91 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.54■■□□□ 1.04
Retreg1dQ8VE91 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Retreg1dQ8VE91 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Retreg1dQ8VE91 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC21.53■■□□□ 1.04
Retreg1dQ8VE91 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Retreg1dQ8VE91 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Retreg1dQ8VE91 Gm43592-201ENSMUST00000196922 1165 ntBASIC21.53■■□□□ 1.04
Retreg1dQ8VE91 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Retreg1dQ8VE91 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Retreg1dQ8VE91 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Retreg1dQ8VE91 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Retreg1dQ8VE91 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Retreg1dQ8VE91 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Retreg1dQ8VE91 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21.52■■□□□ 1.04
Retreg1dQ8VE91 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Retreg1dQ8VE91 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Retreg1dQ8VE91 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Retreg1dQ8VE91 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Retreg1dQ8VE91 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.51■■□□□ 1.03
Retreg1dQ8VE91 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC21.51■■□□□ 1.03
Retreg1dQ8VE91 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Retreg1dQ8VE91 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC21.5■■□□□ 1.03
Retreg1dQ8VE91 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.5■■□□□ 1.03
Retreg1dQ8VE91 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Retreg1dQ8VE91 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.49■■□□□ 1.03
Retreg1dQ8VE91 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Retreg1dQ8VE91 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC21.48■■□□□ 1.03
Retreg1dQ8VE91 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.48■■□□□ 1.03
Retreg1dQ8VE91 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
Retreg1dQ8VE91 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Retreg1dQ8VE91 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Retreg1dQ8VE91 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Retreg1dQ8VE91 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Retreg1dQ8VE91 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC21.47■■□□□ 1.03
Retreg1dQ8VE91 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Retreg1dQ8VE91 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Retreg1dQ8VE91 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Retreg1dQ8VE91 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Retreg1dQ8VE91 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC21.47■■□□□ 1.03
Retreg1dQ8VE91 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC21.47■■□□□ 1.03
Retreg1dQ8VE91 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Retreg1dQ8VE91 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.47■■□□□ 1.03
Retreg1dQ8VE91 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Retreg1dQ8VE91 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Retreg1dQ8VE91 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Retreg1dQ8VE91 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Retreg1dQ8VE91 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Retreg1dQ8VE91 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Retreg1dQ8VE91 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Retreg1dQ8VE91 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Retreg1dQ8VE91 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Retreg1dQ8VE91 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Retreg1dQ8VE91 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
Retreg1dQ8VE91 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Retreg1dQ8VE91 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Retreg1dQ8VE91 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC21.45■■□□□ 1.02
Retreg1dQ8VE91 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Retreg1dQ8VE91 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Retreg1dQ8VE91 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Retreg1dQ8VE91 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Retreg1dQ8VE91 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Retreg1dQ8VE91 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Retreg1dQ8VE91 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Retreg1dQ8VE91 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Retreg1dQ8VE91 Gm5812-201ENSMUST00000061073 957 ntBASIC21.44■■□□□ 1.02
Retreg1dQ8VE91 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Retreg1dQ8VE91 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Retreg1dQ8VE91 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Retreg1dQ8VE91 Gm7199-201ENSMUST00000118327 1485 ntBASIC21.44■■□□□ 1.02
Retreg1dQ8VE91 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC21.43■■□□□ 1.02
Retreg1dQ8VE91 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Retreg1dQ8VE91 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Retreg1dQ8VE91 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Retreg1dQ8VE91 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Retreg1dQ8VE91 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Retreg1dQ8VE91 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Retreg1dQ8VE91 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC21.42■■□□□ 1.02
Retreg1dQ8VE91 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Retreg1dQ8VE91 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Retreg1dQ8VE91 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC21.42■■□□□ 1.02
Retreg1dQ8VE91 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Retreg1dQ8VE91 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC21.42■■□□□ 1.02
Retreg1dQ8VE91 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Retreg1dQ8VE91 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Retreg1dQ8VE91 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC21.42■■□□□ 1.02
Retreg1dQ8VE91 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Retreg1dQ8VE91 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Retreg1dQ8VE91 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Retreg1dQ8VE91 Nsd1-203ENSMUST00000224156 1149 ntBASIC21.41■■□□□ 1.02
Retreg1dQ8VE91 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21.41■■□□□ 1.02
Retreg1dQ8VE91 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Retreg1dQ8VE91 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms