Protein–RNA interactions for Protein: Q8R422

Cd109, CD109 antigen, mousemouse

Predictions only

Length 1,442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd109Q8R422 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC31.86■■■□□ 2.69
Cd109Q8R422 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Cd109Q8R422 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Cd109Q8R422 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC31.86■■■□□ 2.69
Cd109Q8R422 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC31.86■■■□□ 2.69
Cd109Q8R422 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Cd109Q8R422 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
Cd109Q8R422 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
Cd109Q8R422 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
Cd109Q8R422 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
Cd109Q8R422 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
Cd109Q8R422 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
Cd109Q8R422 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
Cd109Q8R422 AC153524.1-201ENSMUST00000220436 1935 ntBASIC31.82■■■□□ 2.68
Cd109Q8R422 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
Cd109Q8R422 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
Cd109Q8R422 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
Cd109Q8R422 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC31.82■■■□□ 2.68
Cd109Q8R422 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
Cd109Q8R422 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC31.81■■■□□ 2.68
Cd109Q8R422 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Cd109Q8R422 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Cd109Q8R422 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Cd109Q8R422 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC31.78■■■□□ 2.68
Cd109Q8R422 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Cd109Q8R422 Gm42699-201ENSMUST00000198104 1657 ntBASIC31.77■■■□□ 2.68
Cd109Q8R422 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC31.77■■■□□ 2.68
Cd109Q8R422 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC31.76■■■□□ 2.68
Cd109Q8R422 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC31.76■■■□□ 2.68
Cd109Q8R422 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
Cd109Q8R422 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
Cd109Q8R422 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC31.76■■■□□ 2.67
Cd109Q8R422 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
Cd109Q8R422 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC31.76■■■□□ 2.67
Cd109Q8R422 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC31.76■■■□□ 2.67
Cd109Q8R422 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC31.76■■■□□ 2.67
Cd109Q8R422 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC31.76■■■□□ 2.67
Cd109Q8R422 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
Cd109Q8R422 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Cd109Q8R422 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Cd109Q8R422 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
Cd109Q8R422 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC31.74■■■□□ 2.67
Cd109Q8R422 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
Cd109Q8R422 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC31.74■■■□□ 2.67
Cd109Q8R422 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
Cd109Q8R422 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
Cd109Q8R422 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
Cd109Q8R422 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC31.73■■■□□ 2.67
Cd109Q8R422 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
Cd109Q8R422 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
Cd109Q8R422 Gm16464-201ENSMUST00000117815 1095 ntBASIC31.73■■■□□ 2.67
Cd109Q8R422 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC31.73■■■□□ 2.67
Cd109Q8R422 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
Cd109Q8R422 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
Cd109Q8R422 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC31.72■■■□□ 2.67
Cd109Q8R422 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC31.72■■■□□ 2.67
Cd109Q8R422 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC31.72■■■□□ 2.67
Cd109Q8R422 AC117245.4-201ENSMUST00000217388 1646 ntBASIC31.72■■■□□ 2.67
Cd109Q8R422 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
Cd109Q8R422 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC31.71■■■□□ 2.67
Cd109Q8R422 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC31.7■■■□□ 2.67
Cd109Q8R422 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
Cd109Q8R422 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
Cd109Q8R422 Nsd1-206ENSMUST00000224918 1001 ntBASIC31.7■■■□□ 2.67
Cd109Q8R422 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC31.7■■■□□ 2.66
Cd109Q8R422 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.66
Cd109Q8R422 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
Cd109Q8R422 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC31.69■■■□□ 2.66
Cd109Q8R422 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
Cd109Q8R422 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
Cd109Q8R422 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
Cd109Q8R422 Gm5131-201ENSMUST00000212776 1238 ntBASIC31.68■■■□□ 2.66
Cd109Q8R422 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC31.68■■■□□ 2.66
Cd109Q8R422 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC31.68■■■□□ 2.66
Cd109Q8R422 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC31.67■■■□□ 2.66
Cd109Q8R422 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
Cd109Q8R422 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC31.66■■■□□ 2.66
Cd109Q8R422 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC31.66■■■□□ 2.66
Cd109Q8R422 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC31.66■■■□□ 2.66
Cd109Q8R422 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC31.66■■■□□ 2.66
Cd109Q8R422 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC31.65■■■□□ 2.66
Cd109Q8R422 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC31.65■■■□□ 2.66
Cd109Q8R422 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC31.65■■■□□ 2.66
Cd109Q8R422 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC31.65■■■□□ 2.66
Cd109Q8R422 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
Cd109Q8R422 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC31.65■■■□□ 2.66
Cd109Q8R422 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
Cd109Q8R422 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
Cd109Q8R422 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
Cd109Q8R422 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
Cd109Q8R422 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC31.64■■■□□ 2.66
Cd109Q8R422 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC31.64■■■□□ 2.66
Cd109Q8R422 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC31.64■■■□□ 2.66
Cd109Q8R422 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC31.63■■■□□ 2.65
Cd109Q8R422 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
Cd109Q8R422 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Cd109Q8R422 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
Cd109Q8R422 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
Cd109Q8R422 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC31.61■■■□□ 2.65
Cd109Q8R422 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
Retrieved 100 of 76,532 protein–RNA pairs in 10.7 ms