Protein–RNA interactions for Protein: Q8CIR4

Trpm6, Transient receptor potential cation channel subfamily M member 6, mousemouse

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm6Q8CIR4 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Trpm6Q8CIR4 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Trpm6Q8CIR4 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC22.34■■□□□ 1.17
Trpm6Q8CIR4 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC22.34■■□□□ 1.17
Trpm6Q8CIR4 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Trpm6Q8CIR4 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC22.33■■□□□ 1.16
Trpm6Q8CIR4 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC22.33■■□□□ 1.16
Trpm6Q8CIR4 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC22.33■■□□□ 1.16
Trpm6Q8CIR4 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Trpm6Q8CIR4 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC22.33■■□□□ 1.16
Trpm6Q8CIR4 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Trpm6Q8CIR4 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Trpm6Q8CIR4 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Trpm6Q8CIR4 AC153524.1-201ENSMUST00000220436 1935 ntBASIC22.32■■□□□ 1.16
Trpm6Q8CIR4 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Trpm6Q8CIR4 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Trpm6Q8CIR4 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Trpm6Q8CIR4 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC22.3■■□□□ 1.16
Trpm6Q8CIR4 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
Trpm6Q8CIR4 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Trpm6Q8CIR4 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Trpm6Q8CIR4 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC22.29■■□□□ 1.16
Trpm6Q8CIR4 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Trpm6Q8CIR4 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Trpm6Q8CIR4 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Trpm6Q8CIR4 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Trpm6Q8CIR4 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
Trpm6Q8CIR4 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Trpm6Q8CIR4 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Trpm6Q8CIR4 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
Trpm6Q8CIR4 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Trpm6Q8CIR4 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Trpm6Q8CIR4 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Trpm6Q8CIR4 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Trpm6Q8CIR4 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC22.27■■□□□ 1.16
Trpm6Q8CIR4 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Trpm6Q8CIR4 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
Trpm6Q8CIR4 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Trpm6Q8CIR4 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
Trpm6Q8CIR4 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Trpm6Q8CIR4 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Trpm6Q8CIR4 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Trpm6Q8CIR4 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Trpm6Q8CIR4 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Trpm6Q8CIR4 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
Trpm6Q8CIR4 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC22.25■■□□□ 1.15
Trpm6Q8CIR4 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Trpm6Q8CIR4 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Trpm6Q8CIR4 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Trpm6Q8CIR4 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Trpm6Q8CIR4 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Trpm6Q8CIR4 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Trpm6Q8CIR4 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Trpm6Q8CIR4 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Trpm6Q8CIR4 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Trpm6Q8CIR4 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Trpm6Q8CIR4 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
Trpm6Q8CIR4 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC22.24■■□□□ 1.15
Trpm6Q8CIR4 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Trpm6Q8CIR4 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC22.23■■□□□ 1.15
Trpm6Q8CIR4 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Trpm6Q8CIR4 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC22.23■■□□□ 1.15
Trpm6Q8CIR4 Gm28536-201ENSMUST00000190971 1317 ntBASIC22.23■■□□□ 1.15
Trpm6Q8CIR4 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
Trpm6Q8CIR4 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Trpm6Q8CIR4 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Trpm6Q8CIR4 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC22.22■■□□□ 1.15
Trpm6Q8CIR4 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Trpm6Q8CIR4 Gm15039-201ENSMUST00000118914 875 ntBASIC22.21■■□□□ 1.15
Trpm6Q8CIR4 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC22.21■■□□□ 1.15
Trpm6Q8CIR4 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC22.21■■□□□ 1.15
Trpm6Q8CIR4 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Trpm6Q8CIR4 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC22.21■■□□□ 1.15
Trpm6Q8CIR4 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Trpm6Q8CIR4 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.15
Trpm6Q8CIR4 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Trpm6Q8CIR4 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
Trpm6Q8CIR4 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC22.2■■□□□ 1.14
Trpm6Q8CIR4 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
Trpm6Q8CIR4 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Trpm6Q8CIR4 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Trpm6Q8CIR4 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Trpm6Q8CIR4 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Trpm6Q8CIR4 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Trpm6Q8CIR4 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Trpm6Q8CIR4 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Trpm6Q8CIR4 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC22.18■■□□□ 1.14
Trpm6Q8CIR4 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Trpm6Q8CIR4 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Trpm6Q8CIR4 AC117245.4-201ENSMUST00000217388 1646 ntBASIC22.17■■□□□ 1.14
Trpm6Q8CIR4 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Trpm6Q8CIR4 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC22.17■■□□□ 1.14
Trpm6Q8CIR4 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Trpm6Q8CIR4 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC22.17■■□□□ 1.14
Trpm6Q8CIR4 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Trpm6Q8CIR4 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Trpm6Q8CIR4 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC22.16■■□□□ 1.14
Trpm6Q8CIR4 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC22.16■■□□□ 1.14
Trpm6Q8CIR4 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC22.16■■□□□ 1.14
Trpm6Q8CIR4 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC22.16■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms