Protein–RNA interactions for Protein: Q8CG50

Rab43, Ras-related protein Rab-43, mousemouse

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab43Q8CG50 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rab43Q8CG50 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Rab43Q8CG50 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC21.49■■□□□ 1.03
Rab43Q8CG50 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rab43Q8CG50 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rab43Q8CG50 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Rab43Q8CG50 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.48■■□□□ 1.03
Rab43Q8CG50 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Rab43Q8CG50 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rab43Q8CG50 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rab43Q8CG50 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Rab43Q8CG50 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rab43Q8CG50 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rab43Q8CG50 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Rab43Q8CG50 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Rab43Q8CG50 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rab43Q8CG50 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Rab43Q8CG50 Etf1-202ENSMUST00000180351 108 ntBASIC21.46■■□□□ 1.03
Rab43Q8CG50 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Rab43Q8CG50 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.03
Rab43Q8CG50 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rab43Q8CG50 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rab43Q8CG50 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rab43Q8CG50 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rab43Q8CG50 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rab43Q8CG50 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rab43Q8CG50 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rab43Q8CG50 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rab43Q8CG50 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rab43Q8CG50 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC21.43■■□□□ 1.02
Rab43Q8CG50 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC21.43■■□□□ 1.02
Rab43Q8CG50 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Rab43Q8CG50 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC21.43■■□□□ 1.02
Rab43Q8CG50 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Rab43Q8CG50 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rab43Q8CG50 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Rab43Q8CG50 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Rab43Q8CG50 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rab43Q8CG50 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rab43Q8CG50 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rab43Q8CG50 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rab43Q8CG50 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Rab43Q8CG50 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC21.42■■□□□ 1.02
Rab43Q8CG50 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Rab43Q8CG50 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Rab43Q8CG50 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rab43Q8CG50 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Rab43Q8CG50 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Rab43Q8CG50 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rab43Q8CG50 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rab43Q8CG50 Gm16464-201ENSMUST00000117815 1095 ntBASIC21.4■■□□□ 1.02
Rab43Q8CG50 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rab43Q8CG50 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rab43Q8CG50 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rab43Q8CG50 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Rab43Q8CG50 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Rab43Q8CG50 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Rab43Q8CG50 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Rab43Q8CG50 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rab43Q8CG50 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rab43Q8CG50 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Rab43Q8CG50 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rab43Q8CG50 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21.37■■□□□ 1.01
Rab43Q8CG50 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rab43Q8CG50 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC21.37■■□□□ 1.01
Rab43Q8CG50 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC21.37■■□□□ 1.01
Rab43Q8CG50 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Rab43Q8CG50 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rab43Q8CG50 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Rab43Q8CG50 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Rab43Q8CG50 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rab43Q8CG50 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rab43Q8CG50 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rab43Q8CG50 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Rab43Q8CG50 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC21.36■■□□□ 1.01
Rab43Q8CG50 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC21.36■■□□□ 1.01
Rab43Q8CG50 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC21.36■■□□□ 1.01
Rab43Q8CG50 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rab43Q8CG50 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Rab43Q8CG50 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rab43Q8CG50 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Rab43Q8CG50 Gm5131-201ENSMUST00000212776 1238 ntBASIC21.35■■□□□ 1.01
Rab43Q8CG50 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC21.35■■□□□ 1.01
Rab43Q8CG50 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC21.35■■□□□ 1.01
Rab43Q8CG50 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.35■■□□□ 1.01
Rab43Q8CG50 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rab43Q8CG50 AC153524.1-201ENSMUST00000220436 1935 ntBASIC21.34■■□□□ 1.01
Rab43Q8CG50 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Rab43Q8CG50 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC21.34■■□□□ 1.01
Rab43Q8CG50 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rab43Q8CG50 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21.34■■□□□ 1.01
Rab43Q8CG50 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Rab43Q8CG50 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Rab43Q8CG50 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC21.33■■□□□ 1.01
Rab43Q8CG50 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC21.33■■□□□ 1.01
Rab43Q8CG50 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC21.33■■□□□ 1.01
Rab43Q8CG50 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Rab43Q8CG50 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.33■■□□□ 1
Rab43Q8CG50 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Rab43Q8CG50 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.32■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 112 ms