Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pcdhb7Q8CDY9 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pcdhb7Q8CDY9 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pcdhb7Q8CDY9 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Pcdhb7Q8CDY9 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Pcdhb7Q8CDY9 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdhb7Q8CDY9 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
Pcdhb7Q8CDY9 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdhb7Q8CDY9 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdhb7Q8CDY9 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdhb7Q8CDY9 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Pcdhb7Q8CDY9 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Pcdhb7Q8CDY9 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdhb7Q8CDY9 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdhb7Q8CDY9 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC21.87■■□□□ 1.09
Pcdhb7Q8CDY9 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdhb7Q8CDY9 Gm11687-201ENSMUST00000118911 886 ntBASIC21.87■■□□□ 1.09
Pcdhb7Q8CDY9 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdhb7Q8CDY9 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdhb7Q8CDY9 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.87■■□□□ 1.09
Pcdhb7Q8CDY9 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.86■■□□□ 1.09
Pcdhb7Q8CDY9 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdhb7Q8CDY9 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdhb7Q8CDY9 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
Pcdhb7Q8CDY9 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdhb7Q8CDY9 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdhb7Q8CDY9 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdhb7Q8CDY9 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdhb7Q8CDY9 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdhb7Q8CDY9 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdhb7Q8CDY9 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdhb7Q8CDY9 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdhb7Q8CDY9 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Pcdhb7Q8CDY9 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdhb7Q8CDY9 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdhb7Q8CDY9 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdhb7Q8CDY9 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdhb7Q8CDY9 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
Pcdhb7Q8CDY9 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Pcdhb7Q8CDY9 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdhb7Q8CDY9 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdhb7Q8CDY9 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
Pcdhb7Q8CDY9 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Pcdhb7Q8CDY9 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Pcdhb7Q8CDY9 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC21.83■■□□□ 1.08
Pcdhb7Q8CDY9 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Pcdhb7Q8CDY9 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Pcdhb7Q8CDY9 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Pcdhb7Q8CDY9 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Pcdhb7Q8CDY9 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.83■■□□□ 1.08
Pcdhb7Q8CDY9 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pcdhb7Q8CDY9 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
Pcdhb7Q8CDY9 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pcdhb7Q8CDY9 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
Pcdhb7Q8CDY9 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pcdhb7Q8CDY9 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pcdhb7Q8CDY9 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdhb7Q8CDY9 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdhb7Q8CDY9 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Pcdhb7Q8CDY9 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdhb7Q8CDY9 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdhb7Q8CDY9 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdhb7Q8CDY9 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdhb7Q8CDY9 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdhb7Q8CDY9 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Pcdhb7Q8CDY9 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC21.8■■□□□ 1.08
Pcdhb7Q8CDY9 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Pcdhb7Q8CDY9 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC21.8■■□□□ 1.08
Pcdhb7Q8CDY9 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdhb7Q8CDY9 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Pcdhb7Q8CDY9 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC21.79■■□□□ 1.08
Pcdhb7Q8CDY9 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdhb7Q8CDY9 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdhb7Q8CDY9 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Pcdhb7Q8CDY9 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Pcdhb7Q8CDY9 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.78■■□□□ 1.08
Pcdhb7Q8CDY9 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.78■■□□□ 1.08
Pcdhb7Q8CDY9 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Pcdhb7Q8CDY9 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.78■■□□□ 1.08
Pcdhb7Q8CDY9 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pcdhb7Q8CDY9 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC21.77■■□□□ 1.08
Pcdhb7Q8CDY9 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pcdhb7Q8CDY9 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhb7Q8CDY9 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Pcdhb7Q8CDY9 Gm44428-201ENSMUST00000204474 874 ntBASIC21.76■■□□□ 1.07
Pcdhb7Q8CDY9 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhb7Q8CDY9 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Pcdhb7Q8CDY9 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhb7Q8CDY9 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhb7Q8CDY9 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC21.75■■□□□ 1.07
Pcdhb7Q8CDY9 Gm7199-201ENSMUST00000118327 1485 ntBASIC21.75■■□□□ 1.07
Pcdhb7Q8CDY9 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdhb7Q8CDY9 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21.73■■□□□ 1.07
Pcdhb7Q8CDY9 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC21.73■■□□□ 1.07
Pcdhb7Q8CDY9 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Pcdhb7Q8CDY9 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhb7Q8CDY9 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhb7Q8CDY9 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhb7Q8CDY9 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhb7Q8CDY9 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC21.72■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 114.9 ms